RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 VSIRQ9H7M9 311 aa10.28□□□□□ -0.76
CDR2-204ENST00000564542 FAM212BQ9NTI7 297 aaPredicted RBP10.28□□□□□ -0.76
CDR2-204ENST00000564542 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
CDR2-204ENST00000564542 TRAV2A0A0B4J234 112 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 LOC100506127A0A0U1RQW1 187 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 IGLL5B9A064 214 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 PMP2P02689 132 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 LEMD1Q68G75 181 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 Q8NAQ8 132 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 OR5H2Q8NGV7 314 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 MS4A6AQ9H2W1 248 aa10.27□□□□□ -0.77
CDR2-204ENST00000564542 DNASE2O00115 360 aaPredicted RBP10.26□□□□□ -0.77
CDR2-204ENST00000564542 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 IGHV3-48P01763 117 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 APOHP02749 345 aaPredicted RBP10.26□□□□□ -0.77
CDR2-204ENST00000564542 NAT1P18440 290 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 DEFB131AP59861 70 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 PHLDA2Q53GA4 152 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 OR4A16Q8NH70 328 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 PINX1Q96BK5 328 aaKnown RBP10.26□□□□□ -0.77
CDR2-204ENST00000564542 S100A16Q96FQ6 103 aaKnown RBP10.26□□□□□ -0.77
CDR2-204ENST00000564542 SEC22AQ96IW7 307 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
CDR2-204ENST00000564542 S100GP29377 79 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 TMEM41BQ5BJD5 291 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 UBE2NLQ5JXB2 153 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 TMEM69Q5SWH9 247 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 ZNF600Q6ZNG1 722 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 H2BFWTQ7Z2G1 175 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 STHQ8IWL8 128 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 LILRB2Q8N423 598 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 FAM24BQ8N5W8 94 aa10.25□□□□□ -0.77
CDR2-204ENST00000564542 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 IGHV3-66A0A0C4DH42 116 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 MIFP14174 115 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 HRH1P35367 487 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 NPBWR1P48145 328 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 TAS2R20P59543 309 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 HSPE1P61604 102 aaKnown RBP10.24□□□□□ -0.77
CDR2-204ENST00000564542 RPL11P62913 178 aaKnown RBP10.24□□□□□ -0.77
CDR2-204ENST00000564542 ERHP84090 104 aaKnown RBP10.24□□□□□ -0.77
CDR2-204ENST00000564542 LPCAT3Q6P1A2 487 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 TBC1D26Q86UD7 250 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 CROCCP3Q8IVE0 287 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 DUSP18Q8NEJ0 188 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 YTHDF1Q9BYJ9 559 aaKnown RBP10.24□□□□□ -0.77
CDR2-204ENST00000564542 TMEM231Q9H6L2 316 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 PUS1Q9Y606 427 aaKnown RBP eCLIP10.24□□□□□ -0.77
CDR2-204ENST00000564542 FAT2Q9NYQ8 4349 aa10.24□□□□□ -0.77
CDR2-204ENST00000564542 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
CDR2-204ENST00000564542 RBMY1A1P0DJD3 496 aaKnown RBP10.23□□□□□ -0.77
CDR2-204ENST00000564542 RBMY1CP0DJD4 496 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 SPP1P10451 314 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 RBMY1FQ15415 496 aaKnown RBP10.23□□□□□ -0.77
CDR2-204ENST00000564542 MORN3Q6PF18 240 aaPredicted RBP10.23□□□□□ -0.77
CDR2-204ENST00000564542 LINC00336Q6ZUF6 198 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 TRPT1Q86TN4 253 aaKnown RBP10.23□□□□□ -0.77
CDR2-204ENST00000564542 MRGPRFQ96AM1 343 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 RABAC1Q9UI14 185 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 PKHD1P08F94 4074 aa10.23□□□□□ -0.77
CDR2-204ENST00000564542 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 A0A1B0GU03 582 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 ZNF705EA8MWA4 302 aaPredicted RBP10.22□□□□□ -0.77
CDR2-204ENST00000564542 HLA-DMAP28067 261 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 PRSS3P35030 304 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 Q6ZTC4 211 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 LYSMD2Q8IV50 215 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 SAMD12Q8N8I0 201 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 GRAMD2BQ96HH9 432 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 Q9H521 79 aa10.22□□□□□ -0.77
CDR2-204ENST00000564542 DNAH2Q9P225 4427 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 A0A1W2PS18 150 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 K7EQG2 157 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 TMEM50AO95807 157 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 C4BPBP20851 252 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 TSPAN5P62079 268 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 NEDD8Q15843 81 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 CENPSQ8N2Z9 138 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 STXBP6Q8NFX7 210 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 X6R8D5 127 aa10.21□□□□□ -0.77
CDR2-204ENST00000564542 CORTO00230 105 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 AMBPP02760 352 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 NPPCP23582 126 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 SNCAP37840 140 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 UCP3P55916 312 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 SPINK9Q5DT21 86 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 PVRIGQ6DKI7 326 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 SLC35G3Q8N808 338 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 GPX8Q8TED1 209 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 METTL26Q96S19 204 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 RNF126Q9BV68 326 aa10.2□□□□□ -0.78
CDR2-204ENST00000564542 ELOA3CA0A087WX78 387 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms