RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ATP6V0E1O15342 81 aa17.34■□□□□ 0.37
LINC01960-201ENST00000563759 CTRB1P17538 263 aa17.34■□□□□ 0.37
LINC01960-201ENST00000563759 ARSJQ5FYB0 599 aaPredicted RBP17.34■□□□□ 0.37
LINC01960-201ENST00000563759 C9orf152Q5JTZ5 239 aa17.34■□□□□ 0.37
LINC01960-201ENST00000563759 CTRB2Q6GPI1 263 aa17.34■□□□□ 0.37
LINC01960-201ENST00000563759 PCNPQ8WW12 178 aaKnown RBP17.34■□□□□ 0.37
LINC01960-201ENST00000563759 TAF15Q92804 592 aaKnown RBP eCLIP17.34■□□□□ 0.37
LINC01960-201ENST00000563759 RSG1Q9BU20 258 aa17.34■□□□□ 0.37
LINC01960-201ENST00000563759 CORTO00230 105 aa17.33■□□□□ 0.37
LINC01960-201ENST00000563759 CD69Q07108 199 aa17.33■□□□□ 0.37
LINC01960-201ENST00000563759 ECSCRQ19T08 205 aa17.33■□□□□ 0.37
LINC01960-201ENST00000563759 SGMS2Q8NHU3 365 aa17.33■□□□□ 0.37
LINC01960-201ENST00000563759 MFAP2P55001 183 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 ASPHD1Q5U4P2 390 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 SLC16A13Q7RTY0 426 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 OR2G3Q8NGZ4 309 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 TMUB1Q9BVT8 246 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 WNT10AQ9GZT5 417 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 VPREB3Q9UKI3 123 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 WDR83OSQ9Y284 106 aa17.33■□□□□ 0.36
LINC01960-201ENST00000563759 NPIPB5A8MRT5 1133 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 FNDC10F2Z333 226 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 HOXA3O43365 443 aaPredicted RBP17.32■□□□□ 0.36
LINC01960-201ENST00000563759 BTNL8Q6UX41 500 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 TREML4Q6UXN2 200 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 TMEM182Q6ZP80 229 aaPredicted RBP17.32■□□□□ 0.36
LINC01960-201ENST00000563759 RNF141Q8WVD5 230 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 SLC35E1Q96K37 410 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 NPVFQ9HCQ7 196 aa17.32■□□□□ 0.36
LINC01960-201ENST00000563759 EGR2P11161 476 aaPredicted RBP17.31■□□□□ 0.36
LINC01960-201ENST00000563759 GPX4P36969 197 aaPredicted RBP17.31■□□□□ 0.36
LINC01960-201ENST00000563759 OR1L6Q8NGR2 347 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 CACNG8Q8WXS5 425 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 NPCDR1Q9BY65 106 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 PRDM13Q9H4Q3 707 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 RFNGQ9Y644 331 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 CRYGCP07315 174 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 PVRIGQ6DKI7 326 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 UNQ5815/PRO19632Q6UWF5 114 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 TTC9CQ8N5M4 171 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 SIGLECL1Q8N7X8 197 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 ZNF709Q8N972 641 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 SMR3AQ99954 134 aa17.31■□□□□ 0.36
LINC01960-201ENST00000563759 FNDC4Q9H6D8 234 aaPredicted RBP17.31■□□□□ 0.36
LINC01960-201ENST00000563759 RPS10-NUDT3A0A1W2PQS6 291 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 MPDU1O75352 247 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 MLANAQ16655 118 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 CLLU1Q5K131 121 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 ETFRF1Q6IPR1 90 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 TEPPQ6URK8 271 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 PSMG3Q9BT73 122 aaPredicted RBP17.3■□□□□ 0.36
LINC01960-201ENST00000563759 DMRT1Q9Y5R6 373 aa17.3■□□□□ 0.36
LINC01960-201ENST00000563759 LINC01548A6NM66 108 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 C17orf112F2Z3M2 114 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 CYB5BO43169 146 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 GAMTQ14353 236 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 OR5T1Q8NG75 326 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 ACY3Q96HD9 319 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 HIVEP2P31629 2446 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 MTORP42345 2549 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 PRH1P02810 166 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 NMBP08949 121 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 MDKP21741 143 aaPredicted RBP17.29■□□□□ 0.36
LINC01960-201ENST00000563759 SULT1A2P50226 295 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 SLC35E3Q7Z769 313 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 LRRC20Q8TCA0 184 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 TIMM9Q9Y5J7 89 aa17.29■□□□□ 0.36
LINC01960-201ENST00000563759 ZNF705EA8MWA4 302 aaPredicted RBP17.28■□□□□ 0.36
LINC01960-201ENST00000563759 IGHV3-48P01763 117 aa17.28■□□□□ 0.36
LINC01960-201ENST00000563759 BLCAPP62952 87 aa17.28■□□□□ 0.36
LINC01960-201ENST00000563759 AKR1C8PQ5T2L2 129 aa17.28■□□□□ 0.36
LINC01960-201ENST00000563759 RBMS3Q6XE24 437 aaKnown RBP17.28■□□□□ 0.36
LINC01960-201ENST00000563759 OR2T6Q8NHC8 308 aa17.28■□□□□ 0.36
LINC01960-201ENST00000563759 MT-CO2P00403 227 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 IGHG2P01859 326 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 RAB31Q13636 194 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 TMEM144Q7Z5S9 345 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 FAM110DQ8TAY7 271 aaPredicted RBP17.27■□□□□ 0.36
LINC01960-201ENST00000563759 TMEM68Q96MH6 324 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 MGST2Q99735 147 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 TMEM160Q9NX00 188 aa17.27■□□□□ 0.36
LINC01960-201ENST00000563759 LSM4Q9Y4Z0 139 aaKnown RBP17.27■□□□□ 0.36
LINC01960-201ENST00000563759 IGHV3-21A0A0B4J1V1 117 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 UMAD1C9J7I0 102 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 G3V318 75 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 TSPAN9O75954 239 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 FAM157CP0CG43 387 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 CAMLGP49069 296 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 ELLP55199 621 aaPredicted RBP17.27■□□□□ 0.35
LINC01960-201ENST00000563759 SCGB2A2Q13296 93 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 AKIRIN2Q53H80 203 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 PLA2G2EQ9NZK7 142 aa17.27■□□□□ 0.35
LINC01960-201ENST00000563759 LY6G6DO95868 133 aa17.26■□□□□ 0.35
LINC01960-201ENST00000563759 RAB5CP51148 216 aa17.26■□□□□ 0.35
LINC01960-201ENST00000563759 SERF2P84101 59 aa17.26■□□□□ 0.35
LINC01960-201ENST00000563759 TRAV41A0A0B4J266 112 aa17.25■□□□□ 0.35
LINC01960-201ENST00000563759 RND2P52198 227 aa17.25■□□□□ 0.35
LINC01960-201ENST00000563759 GGTLC1Q9BX51 225 aa17.25■□□□□ 0.35
LINC01960-201ENST00000563759 KCNIP2Q9NS61 270 aa17.25■□□□□ 0.35
LINC01960-201ENST00000563759 THYN1Q9P016 225 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms