RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 HSD17B13Q7Z5P4 300 aaPredicted RBP5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 SPAG16Q8N0X2 631 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 STXBP6Q8NFX7 210 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 LSM10Q969L4 123 aaKnown RBP5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 RAB3CQ96E17 227 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 AIFM2Q9BRQ8 373 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 CENPOQ9BU64 300 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM140Q9NV12 185 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 RFNGQ9Y644 331 aa5.37□□□□□ -1.55
HERPUD1-206ENST00000563343 A0A1B0GU03 582 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 DENRO43583 198 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 HPRT1P00492 218 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 IGHV3-48P01763 117 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 NQO2P16083 231 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 HIST1H1DP16402 221 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 WNT4P56705 351 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 MRPS15P82914 257 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 ST3GAL4Q11206 333 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 HSD17B12Q53GQ0 312 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 Q6ZSN1 163 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 CCDC197Q8NCU1 140 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 OR1L8Q8NGR8 309 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 OR10R2Q8NGX6 335 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 OR1P1Q8NH06 330 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 SLC25A46Q96AG3 418 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 FAM3DQ96BQ1 224 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 ARPC5LQ9BPX5 153 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 Q9H3A6 140 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 Q9H8V8 135 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 PLGRKTQ9HBL7 147 aa5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 YTHDF2Q9Y5A9 579 aaKnown RBP5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 PUS1Q9Y606 427 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERPUD1-206ENST00000563343 DBX1A6NMT0 343 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 TNFSF12O43508 249 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 MT-CO2P00403 227 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 HLA-DRB4P13762 266 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 DTYMKP23919 212 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 CRYBB3P26998 211 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 P2RY1P47900 373 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 NUTF2P61970 127 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 ICAM4Q14773 271 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 RCN1Q15293 331 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 MSMO1Q15800 293 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 RAB11BQ15907 218 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 ANKRD39Q53RE8 183 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 GDF5OSQ5U4N7 250 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 C1orf146Q5VVC0 180 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 ZNF600Q6ZNG1 722 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 MS4A15Q8N5U1 240 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 NANOGP1Q8N7R0 232 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 PYDC1Q8WXC3 89 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM231Q9H6L2 316 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 PLEKHA2Q9HB19 425 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 CCL28Q9NRJ3 127 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 RAB22AQ9UL26 194 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 AK6Q9Y3D8 172 aaKnown RBP5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 HLA-DRB4X5D2U9 266 aa5.35□□□□□ -1.55
HERPUD1-206ENST00000563343 A0A075B6Q4 140 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 IGHV3OR16-12A0A075B7B8 117 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 A0A1W2PS18 150 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 HELTA6NFD8 242 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 ERICH4A6NGS2 130 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 SULT1C2O00338 296 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 GNG7O60262 68 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 CTXN2P0C2S0 81 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 GNRHRP30968 328 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 ALDH3B2P48448 385 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 CCL18P55774 89 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 DAD1P61803 113 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 DLK1P80370 383 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 KCTD21Q4G0X4 260 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 TTC32Q5I0X7 151 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 OGFRL1Q5TC84 451 aaPredicted RBP5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 LAIR2Q6ISS4 152 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 TMEM91Q6ZNR0 172 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 SSX7Q7RTT5 188 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 CADM3Q8N126 398 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 ZNF709Q8N972 641 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 ZNF114Q8NC26 417 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 NSG2Q9Y328 171 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 U3KQE9 123 aa5.34□□□□□ -1.55
HERPUD1-206ENST00000563343 LOC102723971A0A1B0GUV8 181 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 A0A1W2PPQ1 181 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 RPS10-NUDT3A0A1W2PQS6 291 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 MYL12BO14950 172 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 TMEM50AO95807 157 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 NUDT3O95989 172 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 NPPCP23582 126 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 PPP5CP53041 499 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 FXYD7P58549 80 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 HAMPP81172 84 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 USF2Q15853 346 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 CNIH2Q6PI25 160 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
HERPUD1-206ENST00000563343 DMBX1Q8NFW5 382 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms