RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 CCL28Q9NRJ3 127 aa5.93□□□□□ -1.46
CKLF-208ENST00000563092 TMEM14BQ9NUH8 114 aa5.93□□□□□ -1.46
CKLF-208ENST00000563092 COMMD9Q9P000 198 aa5.93□□□□□ -1.46
CKLF-208ENST00000563092 TBC1D24Q9ULP9 559 aa5.93□□□□□ -1.46
CKLF-208ENST00000563092 IGLV2-18A0A075B6J9 118 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 IGHV3OR16-13A0A075B7E8 117 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 IGHV3-74A0A0B4J1X5 117 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 SULT1C2O00338 296 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 TNFSF12O43508 249 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 IFNA10P01566 189 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 MLLT11Q13015 90 aaPredicted RBP5.92□□□□□ -1.46
CKLF-208ENST00000563092 TOMM20LQ6UXN7 152 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 ZNF367Q7RTV3 350 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 CENPSQ8N2Z9 138 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 UBAC2Q8NBM4 344 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 ZNF114Q8NC26 417 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 OR13F1Q8NGS4 319 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 DCANP1Q8TF63 244 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 NUDCD2Q8WVJ2 157 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 ACOT13Q9NPJ3 140 aa5.92□□□□□ -1.46
CKLF-208ENST00000563092 MARCH11A6NNE9 402 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 ST8SIA3O43173 380 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 YIF1AO95070 293 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 PPYP01298 95 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 IFNA21P01568 189 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 IFNA17P01571 189 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 MFAP4P55083 255 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 FAM3BP58499 235 aaPredicted RBP5.91□□□□□ -1.46
CKLF-208ENST00000563092 CATR1Q13166 79 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 UBE2UQ5VVX9 321 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 ZNF705AQ6ZN79 300 aaPredicted RBP5.91□□□□□ -1.46
CKLF-208ENST00000563092 ZNF818PQ6ZRF7 136 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 NEU1Q99519 415 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 GINS3Q9BRX5 216 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 DUSP21Q9H596 190 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 SCRT2Q9NQ03 307 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 CLEC5AQ9NY25 188 aa5.91□□□□□ -1.46
CKLF-208ENST00000563092 TMEM235A6NFC5 223 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 KNCNA6PVL3 124 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 ZNF705FA8MVS1 300 aaPredicted RBP5.9□□□□□ -1.46
CKLF-208ENST00000563092 PTGES3LE9PB15 166 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 DNASE2O00115 360 aaPredicted RBP5.9□□□□□ -1.46
CKLF-208ENST00000563092 PDCD5O14737 125 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 ZNF705DP0CH99 300 aaPredicted RBP5.9□□□□□ -1.46
CKLF-208ENST00000563092 ZNF705BP0CI00 300 aaPredicted RBP5.9□□□□□ -1.46
CKLF-208ENST00000563092 NPY1RP25929 384 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 CRYBB3P26998 211 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 FCGR2CP31995 323 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 DMBX1Q8NFW5 382 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 SECTM1Q8WVN6 248 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 SLC25A46Q96AG3 418 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 ATG5Q9H1Y0 275 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 OR51B2Q9Y5P1 312 aa5.9□□□□□ -1.46
CKLF-208ENST00000563092 NACAE9PAV3 2078 aa5.9□□□□□ -1.47
CKLF-208ENST00000563092 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 A0A1B0GU03 582 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 MT-CO2P00403 227 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 PTHLHP12272 177 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 F2RP25116 425 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 GNRHRP30968 328 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 OXA1LQ15070 435 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 ACTL10Q5JWF8 245 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 HOGA1Q86XE5 327 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 OR51H1Q8NH63 302 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 TMEM56Q96MV1 263 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 RAB40CQ96S21 281 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 MGLLQ99685 303 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 SLC5A7Q9GZV3 580 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 FKBP11Q9NYL4 201 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 PRNDQ9UKY0 176 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 NSG2Q9Y328 171 aa5.89□□□□□ -1.47
CKLF-208ENST00000563092 PUS1Q9Y606 427 aaKnown RBP eCLIP5.89□□□□□ -1.47
CKLF-208ENST00000563092 IGHV3-66A0A0C4DH42 116 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 TMEM189A5PLL7 270 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 SMIM9A6NGZ8 99 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 KRTAP9-7A8MTY7 169 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 GNG7O60262 68 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 SCGNO76038 276 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 EIF4EP06730 217 aaKnown RBP5.88□□□□□ -1.47
CKLF-208ENST00000563092 ZNF688P0C7X2 276 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 SPART-AS1P0CW21 52 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 HSMCR30P0CW71 290 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 RAB3BP20337 219 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 VAMP1P23763 118 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 FGF9P31371 208 aaPredicted RBP5.88□□□□□ -1.47
CKLF-208ENST00000563092 GNG2P59768 71 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 ARPC4P59998 168 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 RCN1Q15293 331 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 KCTD21Q4G0X4 260 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 ZNF600Q6ZNG1 722 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 UBE2DNLQ8IWF7 75 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 BEST4Q8NFU0 473 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 FCAMRQ8WWV6 532 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 HINT2Q9BX68 163 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 C1QTNF4Q9BXJ3 329 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 TMEM231Q9H6L2 316 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 SEPSECSQ9HD40 501 aaKnown RBP5.88□□□□□ -1.47
CKLF-208ENST00000563092 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 RABAC1Q9UI14 185 aa5.88□□□□□ -1.47
CKLF-208ENST00000563092 U3KQE9 123 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms