RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 BLOC1S1P78537 153 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 NDPQ00604 133 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 RUNX1Q01196 453 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 RAB31Q13636 194 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 ARSJQ5FYB0 599 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-205ENST00000562310 CTRB2Q6GPI1 263 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 TMEM219Q86XT9 240 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 FBXO7Q9Y3I1 522 aa11.31□□□□□ -0.6
COMMD4-205ENST00000562310 CCDC168Q8NDH2 2452 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 LINC00862A6NCI5 91 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 ZNF705EA8MWA4 302 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-205ENST00000562310 FAM157CP0CG43 387 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 OPRK1P41145 380 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 TREML4Q6UXN2 200 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-205ENST00000562310 TMEM144Q7Z5S9 345 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-205ENST00000562310 TTC9CQ8N5M4 171 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 SGMS2Q8NHU3 365 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 RSG1Q9BU20 258 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 NPCDR1Q9BY65 106 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 PARP11Q9NR21 331 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 MED9Q9NWA0 146 aa11.3□□□□□ -0.6
COMMD4-205ENST00000562310 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
COMMD4-205ENST00000562310 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-205ENST00000562310 ITPR2Q14571 2701 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 MDFIC2A0A1B0GVS7 189 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 MBP02144 154 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 PRH1P02810 166 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 DEFA4P12838 97 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 IER3P46695 156 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 CAMLGP49069 296 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 KRTAP1-1Q07627 177 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 LY6EQ16553 131 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 HSPB9Q9BQS6 159 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
COMMD4-205ENST00000562310 APELAP0DMC3 54 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 HIST1H1BP16401 226 aaKnown RBP11.28□□□□□ -0.6
COMMD4-205ENST00000562310 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
COMMD4-205ENST00000562310 CRIP2P52943 208 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-205ENST00000562310 MFAP2P55001 183 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 GAMTQ14353 236 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 Q6YL49 198 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
COMMD4-205ENST00000562310 FAM103A1Q9BTL3 118 aaKnown RBP11.28□□□□□ -0.6
COMMD4-205ENST00000562310 WNT10AQ9GZT5 417 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
COMMD4-205ENST00000562310 CSPG4Q6UVK1 2322 aa11.27□□□□□ -0.6
COMMD4-205ENST00000562310 NUDT19A8MXV4 375 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 AMY1AP04745 511 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-205ENST00000562310 TMEM41BQ5BJD5 291 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 ASPHD1Q5U4P2 390 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 Q6ZRG5 221 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 FAM213BQ8TBF2 198 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 PCNPQ8WW12 178 aaKnown RBP11.27□□□□□ -0.61
COMMD4-205ENST00000562310 MGST2Q99735 147 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 GGTLC1Q9BX51 225 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-205ENST00000562310 YAE1D1Q9NRH1 226 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 THYN1Q9P016 225 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 ZNF580Q9UK33 172 aa11.27□□□□□ -0.61
COMMD4-205ENST00000562310 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 IGLV11-55A0A075B6I3 123 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 AGPAT2O15120 278 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 KLK9Q2XQG4 91 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 AKIRIN2Q53H80 203 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 FFAR4Q5NUL3 377 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 PXDC1Q5TGL8 231 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 UNQ5815/PRO19632Q6UWF5 114 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 TMEM86BQ8N661 226 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 THAP8Q8NA92 274 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 ACY3Q96HD9 319 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 CXorf58Q96LI9 332 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 KLK9Q9UKQ9 250 aa11.26□□□□□ -0.61
COMMD4-205ENST00000562310 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
COMMD4-205ENST00000562310 I3L2K1 104 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 TSPAN15O95858 294 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 MT-CO2P00403 227 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 IGHG2P01859 326 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 IGF1P05019 195 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 RPL29P47914 159 aaKnown RBP11.25□□□□□ -0.61
COMMD4-205ENST00000562310 RND2P52198 227 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 ELLP55199 621 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-205ENST00000562310 ZNF616Q08AN1 781 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
COMMD4-205ENST00000562310 ACOT6Q3I5F7 207 aaPredicted RBP11.25□□□□□ -0.61
COMMD4-205ENST00000562310 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms