RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 A0A1W2PRE2 83 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 RTL8BQ17RB0 113 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 DHRS13Q6UX07 377 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 IGF2BP2-AS1Q96M15 143 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 LINC00479Q96M42 142 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 TRAV5A0A0B4J249 113 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 UPK2O00526 184 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 IGLV1-44P01699 117 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 SLAQ13239 276 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 GUSBP1Q15486 140 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 MSMPQ1L6U9 139 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 C19orf35Q6ZS72 473 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 STPG4Q8N801 248 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 FAM168AQ92567 244 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
VPS9D1-202ENST00000561976 LNP1A1A4G5 178 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 ITGB1BP1O14713 200 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 ZNF883P0CG24 379 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 DEFB108BQ8NET1 73 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 TNCP24821 2201 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 MUC3AQ02505 3323 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 GPR179Q6PRD1 2367 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 TEX50A0A1B0GTY4 177 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 IGKV1-16P04430 117 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 CGB3P0DN86 165 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 CGB7P0DN87 165 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 MFAP2P55001 183 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 STUMQ69YW2 141 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 LCN12Q6JVE5 192 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 DUX4L9Q6RFH8 374 aaPredicted RBP11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 ITLN1Q8WWA0 313 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 ZNF257Q9Y2Q1 563 aa11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 DSPP15924 2871 aaKnown RBP11.4□□□□□ -0.58
VPS9D1-202ENST00000561976 HSBP1O75506 76 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 MMP23AO75900 390 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 OR10W1Q8NGF6 305 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 C18orf32Q8TCD1 76 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 REG1AP05451 166 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 CFHR2P36980 270 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 CCL11P51671 97 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 POU2AF1Q16633 256 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 MORN5Q5VZ52 161 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 PRR27Q6MZM9 219 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 BHLHA15Q7RTS1 189 aaPredicted RBP11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 COMMD5Q9GZQ3 224 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 IGHG3P01860 377 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 MAJINQ3KP22 176 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 C2orf83Q53S99 150 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 RND1Q92730 232 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 CLEC7AQ9BXN2 247 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 ZNRD1Q9P1U0 126 aa11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 AMMECR1Q9Y4X0 333 aaPredicted RBP11.39□□□□□ -0.59
VPS9D1-202ENST00000561976 M0R1B8 84 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 SELENOVP59797 346 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 TNXAQ16473 311 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 PROCRQ9UNN8 238 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 M0R2Z0 102 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 CT45A6P0DMU7 189 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 CT45A5P0DMU8 189 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 CT45A7P0DMV0 189 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 PYYP10082 97 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 RNASE2P10153 161 aaKnown RBP11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 HINT1P49773 126 aaPredicted RBP11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 CD69Q07108 199 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 PNKDQ8N490 385 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 MRPL32Q9BYC8 188 aaKnown RBP11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 NCOR1O75376 2440 aa11.38□□□□□ -0.59
VPS9D1-202ENST00000561976 CADP27708 2225 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 C20orf202A1L168 122 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 COX7A2P2O60397 106 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 SAA1P0DJI8 122 aaPredicted RBP11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 KLF3P57682 345 aaPredicted RBP11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 Q56UQ5 140 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 HES3Q5TGS1 186 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 RNASEKQ6P5S7 137 aaKnown RBP11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 SPACA3Q8IXA5 215 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 ZNF71Q9NQZ8 489 aaPredicted RBP11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 PLSCR4Q9NRQ2 329 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 NDUFB8O95169 186 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 GPR6P46095 362 aaPredicted RBP11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 CAMPP49913 170 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 FAM167A-AS1Q96KT0 104 aa11.37□□□□□ -0.59
VPS9D1-202ENST00000561976 LHBP01229 141 aa11.36□□□□□ -0.59
VPS9D1-202ENST00000561976 CD59P13987 128 aa11.36□□□□□ -0.59
VPS9D1-202ENST00000561976 TBR1Q16650 682 aa11.36□□□□□ -0.59
VPS9D1-202ENST00000561976 NUP35Q8NFH5 326 aa11.36□□□□□ -0.59
VPS9D1-202ENST00000561976 OR5B3Q8NH48 314 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms