RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 VSIRQ9H7M9 311 aa10.67□□□□□ -0.7
SPG7-205ENST00000561945 TRAV14DV4A0A0A6YYC5 116 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 PRSS3P35030 304 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 HRH1P35367 487 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 TGFBR1P36897 503 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 VBP1P61758 197 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 ZNF124Q15973 351 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 SLC25A46Q96AG3 418 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 CMTM3Q96MX0 182 aa10.66□□□□□ -0.7
SPG7-205ENST00000561945 PKHD1P08F94 4074 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 MT-CO2P00403 227 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 ALDH3B2P48448 385 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 TCTAP57738 103 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 HSPE1P61604 102 aaKnown RBP10.65□□□□□ -0.7
SPG7-205ENST00000561945 NCS1P62166 190 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 GPR107Q5VW38 600 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 SAMD12Q8N8I0 201 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 RARRES2Q99969 163 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
SPG7-205ENST00000561945 DNAH11Q96DT5 4516 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 DFFBO76075 338 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 RORCP51449 518 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 ZFAND3Q9H8U3 227 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 SCPEP1Q9HB40 452 aa10.64□□□□□ -0.71
SPG7-205ENST00000561945 GABARAPO95166 117 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 P0C879 139 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 HLA-DMAP28067 261 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 RPL5P46777 297 aaKnown RBP10.63□□□□□ -0.71
SPG7-205ENST00000561945 PHLDA2Q53GA4 152 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 MZT2AQ6P582 158 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 H2BFWTQ7Z2G1 175 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 OR4A16Q8NH70 328 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 C11orf45Q8TAV5 145 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 MISP3Q96FF7 219 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 GINS3Q9BRX5 216 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 ABCA13Q86UQ4 5058 aa10.63□□□□□ -0.71
SPG7-205ENST00000561945 SMIM31A0A1B0GVY4 71 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 GNG7O60262 68 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 DEDDO75618 318 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 YIF1AO95070 293 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 APOA1P02647 267 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 EIF4EP06730 217 aaKnown RBP10.62□□□□□ -0.71
SPG7-205ENST00000561945 S100GP29377 79 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 RND3P61587 244 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 PAFAH1B2P68402 229 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 LILRB2Q8N423 598 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 OR11H2Q8NH07 326 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 ST8SIA2Q92186 375 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 AP3S1Q92572 193 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 MS4A6AQ9H2W1 248 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 HRH4Q9H3N8 390 aa10.62□□□□□ -0.71
SPG7-205ENST00000561945 IGHV3-49A0A0A0MS15 119 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 NOL3O60936 208 aaKnown RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 APOHP02749 345 aaPredicted RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 RCVRNP35243 200 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 TFPI2P48307 235 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 NANOS2P60321 138 aaKnown RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 TSPAN5P62079 268 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 ERHP84090 104 aaKnown RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 CTF1Q16619 201 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 ZNF600Q6ZNG1 722 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 CLVS1Q8IUQ0 354 aaPredicted RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 MRGPRFQ96AM1 343 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 ZNF486Q96H40 463 aaPredicted RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 NAA50Q9GZZ1 169 aaKnown RBP10.61□□□□□ -0.71
SPG7-205ENST00000561945 COMMD3Q9UBI1 195 aa10.61□□□□□ -0.71
SPG7-205ENST00000561945 CORTO00230 105 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 TMEM50AO95807 157 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 IGKV1-5P01602 117 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 GIG44P09565 113 aaPredicted RBP10.6□□□□□ -0.71
SPG7-205ENST00000561945 ZNF182P17025 639 aaPredicted RBP10.6□□□□□ -0.71
SPG7-205ENST00000561945 NPBWR1P48145 328 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 LHFPL1Q86WI0 220 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 Q8NAQ8 132 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 DUSP18Q8NEJ0 188 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 RAB2BQ8WUD1 216 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
SPG7-205ENST00000561945 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPG7-205ENST00000561945 IGHV3OR16-13A0A075B7E8 117 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 IGHV3-74A0A0B4J1X5 117 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 A0A0B4J293 547 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 A0A1B0GU03 582 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
SPG7-205ENST00000561945 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 TMBIM6P55061 237 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PRR20EP86478 221 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PRR20CP86479 221 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PRR20DP86480 221 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PRR20BP86481 221 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PRR20AP86496 221 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 TMEM187Q14656 261 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 BSXQ3C1V8 233 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 AARDQ4LEZ3 155 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 TMEM41BQ5BJD5 291 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms