RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 MLXQ9UH92 298 aa11.67□□□□□ -0.54
CCDC113-203ENST00000561517 UFC1Q9Y3C8 167 aa11.67□□□□□ -0.54
CCDC113-203ENST00000561517 NDUFA4O00483 81 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 CTSGP08311 255 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 PYDC2Q56P42 97 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 SPINK9Q5DT21 86 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
CCDC113-203ENST00000561517 PVRIGQ6DKI7 326 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 Q6ZRM9 215 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 MISP3Q96FF7 219 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 TXN2Q99757 166 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 MCUBQ9NWR8 336 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 GAR1Q9NY12 217 aaKnown RBP11.66□□□□□ -0.54
CCDC113-203ENST00000561517 MRPL27Q9P0M9 148 aaKnown RBP11.66□□□□□ -0.54
CCDC113-203ENST00000561517 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
CCDC113-203ENST00000561517 MT-CO2P00403 227 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 IFNA17P01571 189 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 ETV6P41212 452 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 MFAP4P55083 255 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 Q56UQ5 140 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 TMEM61Q8N0U2 210 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 OR52E5Q8NH55 327 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
CCDC113-203ENST00000561517 WDR89Q96FK6 387 aaPredicted RBP11.65□□□□□ -0.54
CCDC113-203ENST00000561517 ZNF414Q96IQ9 312 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 PDCD10Q9BUL8 212 aa11.65□□□□□ -0.54
CCDC113-203ENST00000561517 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.54
CCDC113-203ENST00000561517 CD7P09564 240 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 RNASE2P10153 161 aaKnown RBP11.64□□□□□ -0.55
CCDC113-203ENST00000561517 FAUP35544 74 aaKnown RBP11.64□□□□□ -0.55
CCDC113-203ENST00000561517 SNCAP37840 140 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 AP3S2P59780 193 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 CD81P60033 236 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 TMEM187Q14656 261 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 TOMM5Q8N4H5 51 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 UBAC2Q8NBM4 344 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 DEDD2Q8WXF8 326 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 IL22RA2Q969J5 263 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 NEURL2Q9BR09 285 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 TM2D3Q9BRN9 247 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 DAZ1Q9NQZ3 744 aaKnown RBP11.64□□□□□ -0.55
CCDC113-203ENST00000561517 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.64□□□□□ -0.55
CCDC113-203ENST00000561517 KCNIP3Q9Y2W7 256 aa11.64□□□□□ -0.55
CCDC113-203ENST00000561517 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 K7EMT4 169 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 HOXA1P49639 335 aaPredicted RBP11.63□□□□□ -0.55
CCDC113-203ENST00000561517 SPCS3P61009 180 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 SUPT4H1P63272 117 aaKnown RBP11.63□□□□□ -0.55
CCDC113-203ENST00000561517 GUCA2BQ16661 112 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 BSXQ3C1V8 233 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 BTNL8Q6UX41 500 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 GPR146Q96CH1 333 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 RCHY1Q96PM5 261 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 CACNG5Q9UF02 275 aa11.63□□□□□ -0.55
CCDC113-203ENST00000561517 NUPL2O15504 423 aaKnown RBP11.62□□□□□ -0.55
CCDC113-203ENST00000561517 SUB1P53999 127 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCDC113-203ENST00000561517 RELQ04864 619 aaPredicted RBP11.62□□□□□ -0.55
CCDC113-203ENST00000561517 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
CCDC113-203ENST00000561517 PINX1Q96BK5 328 aaKnown RBP11.62□□□□□ -0.55
CCDC113-203ENST00000561517 TUBA4BQ9H853 241 aa11.62□□□□□ -0.55
CCDC113-203ENST00000561517 ZMAT4Q9H898 229 aa11.62□□□□□ -0.55
CCDC113-203ENST00000561517 ENY2Q9NPA8 101 aa11.62□□□□□ -0.55
CCDC113-203ENST00000561517 SELENOKQ9Y6D0 94 aa11.62□□□□□ -0.55
CCDC113-203ENST00000561517 C15orf62A8K5M9 175 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 CORTO00230 105 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 IGHV3-48P01763 117 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 AKR1C4P17516 323 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 HAGHQ16775 308 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 SPANXN2Q5MJ10 180 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 OR10C1Q96KK4 312 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 C20orf24Q9BUV8 137 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 SRRQ9GZT4 340 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 PRR13Q9NZ81 148 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 NBEAL2Q6ZNJ1 2754 aa11.61□□□□□ -0.55
CCDC113-203ENST00000561517 A0A0B4J2A0 478 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 GNG7O60262 68 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 SCAF4O95104 1147 aaKnown RBP11.6□□□□□ -0.55
CCDC113-203ENST00000561517 NPBWR1P48145 328 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 SLC16A13Q7RTY0 426 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 DEFB125Q8N687 156 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 DUSP18Q8NEJ0 188 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 SLC25A21Q9BQT8 299 aaPredicted RBP11.6□□□□□ -0.55
CCDC113-203ENST00000561517 FNDC4Q9H6D8 234 aaPredicted RBP11.6□□□□□ -0.55
CCDC113-203ENST00000561517 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 SHPKQ9UHJ6 478 aa11.6□□□□□ -0.55
CCDC113-203ENST00000561517 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 TSPAN4O14817 238 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 SULT1A3P0DMM9 295 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 SULT1A4P0DMN0 295 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 ANXA3P12429 323 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 HTR2BP41595 481 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 SRPXP78539 464 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 ANKRD55Q3KP44 614 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 TMEM128Q5BJH2 165 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 NMSQ5H8A3 153 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms