RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 AKIRIN2Q53H80 203 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 C9orf152Q5JTZ5 239 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 CTRB2Q6GPI1 263 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 UNQ5815/PRO19632Q6UWF5 114 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 TMEM86BQ8N661 226 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 HSD17B11Q8NBQ5 300 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 LFNGQ8NES3 379 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 OR2G3Q8NGZ4 309 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 RNF141Q8WVD5 230 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 TMEM170AQ8WVE7 144 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 TMED6Q8WW62 240 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 TAF15Q92804 592 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP3-219ENST00000561326 MISP3Q96FF7 219 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 SLC35E1Q96K37 410 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 WDR61Q9GZS3 305 aaKnown RBP8.15□□□□□ -1.1
USP3-219ENST00000561326 SLC25A32Q9H2D1 315 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 PARP11Q9NR21 331 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 VPREB3Q9UKI3 123 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 FBXO7Q9Y3I1 522 aa8.15□□□□□ -1.1
USP3-219ENST00000561326 SONP18583 2426 aaKnown RBP8.15□□□□□ -1.1
USP3-219ENST00000561326 UMAD1C9J7I0 102 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 PRSS46E5RG02 174 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 SOX15O60248 233 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 IGHG2P01859 326 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 AMY1AP04745 511 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 HIST1H1BP16401 226 aaKnown RBP8.14□□□□□ -1.11
USP3-219ENST00000561326 ATP6V0CP27449 155 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 OPRK1P41145 380 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 RAB5CP51148 216 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 SERF2P84101 59 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 AKR1C1Q04828 323 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 PVRIGQ6DKI7 326 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 BTNL8Q6UX41 500 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 IL17RELQ6ZVW7 336 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 SLC35E3Q7Z769 313 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 SIGLECL1Q8N7X8 197 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 HSPB9Q9BQS6 159 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 PSMG3Q9BT73 122 aaPredicted RBP8.14□□□□□ -1.11
USP3-219ENST00000561326 FAM103A1Q9BTL3 118 aaKnown RBP8.14□□□□□ -1.11
USP3-219ENST00000561326 PRSS22Q9GZN4 317 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 KCNIP2Q9NS61 270 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 TIMM9Q9Y5J7 89 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 HIVEP2P31629 2446 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 AKAP9Q99996 3911 aa8.14□□□□□ -1.11
USP3-219ENST00000561326 TRIM77I1YAP6 450 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 AP4M1O00189 453 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 HOXA3O43365 443 aaPredicted RBP8.13□□□□□ -1.11
USP3-219ENST00000561326 LY6G6DO95868 133 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 EGR2P11161 476 aaPredicted RBP8.13□□□□□ -1.11
USP3-219ENST00000561326 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 GAMTQ14353 236 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 ARSJQ5FYB0 599 aaPredicted RBP8.13□□□□□ -1.11
USP3-219ENST00000561326 AKR1C8PQ5T2L2 129 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 TREML4Q6UXN2 200 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 SLC16A13Q7RTY0 426 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 OR5T1Q8NG75 326 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 FAM110DQ8TAY7 271 aaPredicted RBP8.13□□□□□ -1.11
USP3-219ENST00000561326 ZNF48Q96MX3 618 aaPredicted RBP8.13□□□□□ -1.11
USP3-219ENST00000561326 NPFFR1Q9GZQ6 430 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 TNFRSF19Q9NS68 423 aa8.13□□□□□ -1.11
USP3-219ENST00000561326 TRAV41A0A0B4J266 112 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 MBP02144 154 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 PRH1P02810 166 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 IGF1P05019 195 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 SRD5A1P18405 259 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 SULT1A2P50226 295 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 CRIP2P52943 208 aaPredicted RBP8.12□□□□□ -1.11
USP3-219ENST00000561326 NDPQ00604 133 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 ECSCRQ19T08 205 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 CENPVQ7Z7K6 275 aaPredicted RBP8.12□□□□□ -1.11
USP3-219ENST00000561326 ZNF418Q8TF45 676 aaPredicted RBP8.12□□□□□ -1.11
USP3-219ENST00000561326 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
USP3-219ENST00000561326 ZNF355PQ9NSJ1 428 aa8.12□□□□□ -1.11
USP3-219ENST00000561326 SH2D7A6NKC9 451 aaPredicted RBP8.11□□□□□ -1.11
USP3-219ENST00000561326 LINC01548A6NM66 108 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 ZNF705EA8MWA4 302 aaPredicted RBP8.11□□□□□ -1.11
USP3-219ENST00000561326 SCGB2A1O75556 95 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 MT-CO2P00403 227 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 FABP1P07148 127 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 MDKP21741 143 aaPredicted RBP8.11□□□□□ -1.11
USP3-219ENST00000561326 CAMLGP49069 296 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 MFAP2P55001 183 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 BLCAPP62952 87 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 RUNX1Q01196 453 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 MLANAQ16655 118 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 CLLU1Q5K131 121 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 ASPHD1Q5U4P2 390 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 ACY3Q96HD9 319 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 RSG1Q9BU20 258 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 NPCDR1Q9BY65 106 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 SH3BGRL3Q9H299 93 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 OTOGQ6ZRI0 2925 aa8.11□□□□□ -1.11
USP3-219ENST00000561326 IGLV11-55A0A075B6I3 123 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms