RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	FAM25G	B3EWG6	89 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	ZNF207	O43670	478 aa	Known RBP	5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	CD3D	P04234	171 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	ALDH3B2	P48448	385 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	RORC	P51449	518 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	PPP5C	P53041	499 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	UCP3	P55916	312 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	SPCS2	Q15005	226 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	FAM106A	Q4KMX7	169 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	SPINK9	Q5DT21	86 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	THOC7	Q6I9Y2	204 aa	Known RBP	5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	PLET1	Q6UQ28	207 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	SLC38A6	Q8IZM9	456 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	CADM3	Q8N126	398 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	VN1R17P	Q8TDU5	208 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	SCARB1	Q8WTV0	552 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	ISOC1	Q96CN7	298 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	TP53RK	Q96S44	253 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	SLC2A8	Q9NY64	477 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304	EXTL2	Q9UBQ6	330 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304		X6R8D5	127 aa		5.53	□□□□□ -1.52
ZEB1-223	ENST00000561304		A0A0G2JRQ6	117 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	SNAPC5	O75971	98 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	IGKV1-5	P01602	117 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	IGHV3-48	P01763	117 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304		P0C879	139 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	ZNF182	P17025	639 aa	Predicted RBP	5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	FAAP20	Q6NZ36	180 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR2C3	Q8N628	320 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	UBAC2	Q8NBM4	344 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR52B4	Q8NGK2	314 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR5B3	Q8NH48	314 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	BSCL2	Q96G97	398 aa	Predicted RBP	5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	MRPS26	Q9BYN8	205 aa	Known RBP	5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	C21orf62	Q9NYP8	219 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	THYN1	Q9P016	225 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	MTFP1	Q9UDX5	166 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	UBQLN2	Q9UHD9	624 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	PRND	Q9UKY0	176 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304	AGRN	O00468	2067 aa		5.52	□□□□□ -1.53
ZEB1-223	ENST00000561304		I3L2K1	104 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	CTDSP2	O14595	271 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	PGAM2	P15259	253 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	ELL	P55199	621 aa	Predicted RBP	5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	PIGP	P57054	158 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	RND3	P61587	244 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	PRCD	Q00LT1	54 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	ODF3L2	Q3SX64	289 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	SP6	Q3SY56	376 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	RNASE10	Q5GAN6	216 aa	Known RBP	5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	LPCAT3	Q6P1A2	487 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	MZT2A	Q6P582	158 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	H2BFWT	Q7Z2G1	175 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	ZNF114	Q8NC26	417 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR1P1	Q8NH06	330 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	PALMD	Q9NP74	551 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	MRPL27	Q9P0M9	148 aa	Known RBP	5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	PLA2G2D	Q9UNK4	145 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	UFC1	Q9Y3C8	167 aa		5.51	□□□□□ -1.53
ZEB1-223	ENST00000561304	VPS13D	Q5THJ4	4388 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	IGHV3-49	A0A0A0MS15	119 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304		A0A0B4J293	547 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	LCE6A	A0A183	80 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	NDUFA4	O00483	81 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	ST8SIA3	O43173	380 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	MT-CO2	P00403	227 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	CD74	P04233	296 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	CTSG	P08311	255 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304		Q56UQ5	140 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	SPSB3	Q6PJ21	355 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	SLC16A13	Q7RTY0	426 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR1L6	Q8NGR2	347 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR13C8	Q8NGS7	320 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	OR4A16	Q8NH70	328 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	LHFPL5	Q8TAF8	219 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	MARCH1	Q8TCQ1	289 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	AP3S1	Q92572	193 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	MARC2	Q969Z3	335 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	TMEM56	Q96MV1	263 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	TSC22D3	Q99576	134 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	C20orf24	Q9BUV8	137 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	C5orf66	Q9H5L9	145 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	DAZ1	Q9NQZ3	744 aa	Known RBP	5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	FKBP11	Q9NYL4	201 aa		5.5	□□□□□ -1.53
ZEB1-223	ENST00000561304	IGHV3OR16-13	A0A075B7E8	117 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	IGHV3-74	A0A0B4J1X5	117 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	TRAV25	A0A0B4J276	109 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	GABARAP	H6UMI1	98 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	TSPAN4	O14817	238 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	RGS5	O15539	181 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	CYB5B	O43169	146 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	IFNA6	P05013	189 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	TBP	P20226	339 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	UCP1	P25874	307 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	S100G	P29377	79 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	TAS2R19	P59542	299 aa		5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	HSPE1	P61604	102 aa	Known RBP	5.49	□□□□□ -1.53
ZEB1-223	ENST00000561304	EWSR1	Q01844	656 aa	Known RBP eCLIP	5.49	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms