RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 IGHV3-48P01763 117 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 SULT1A3P0DMM9 295 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 SULT1A4P0DMN0 295 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 EDN2P20800 178 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 NMSQ5H8A3 153 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 GPHB5Q86YW7 130 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 FLVCR2Q9UPI3 526 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 INS-IGF2F8WCM5 200 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 SFT2D2O95562 160 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 MT-CO2P00403 227 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 BTCP35070 178 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 ANKRD55Q3KP44 614 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 FAM106AQ4KMX7 169 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 AARDQ4LEZ3 155 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 OR52E5Q8NH55 327 aa15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 BSCL2Q96G97 398 aaPredicted RBP15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 C7orf50Q9BRJ6 194 aaKnown RBP15.15■□□□□ 0.02
TSPAN3-210ENST00000561277 CEBPZOSA8MTT3 80 aa15.14■□□□□ 0.01
TSPAN3-210ENST00000561277 F8W735 103 aaPredicted RBP15.14■□□□□ 0.01
TSPAN3-210ENST00000561277 I3L2K1 104 aa15.14■□□□□ 0.01
TSPAN3-210ENST00000561277 GP9P14770 177 aa15.14■□□□□ 0.01
TSPAN3-210ENST00000561277 SIGLEC8Q9NYZ4 499 aa15.14■□□□□ 0.01
TSPAN3-210ENST00000561277 SORL1Q92673 2214 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 C2orf70A6NJV1 201 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 LGALS9O00182 355 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 RNASE2P10153 161 aaKnown RBP15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 SMCO1Q147U7 214 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 UNQ9165/PRO28630Q6UXU0 137 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 DYNLRB2Q8TF09 96 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 CACNG8Q8WXS5 425 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 CHRDL1Q9BU40 450 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 CCDC32Q9BV29 185 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 PTTG2Q9NZH5 202 aa15.13■□□□□ 0.01
TSPAN3-210ENST00000561277 PLA2G10O15496 165 aa15.12■□□□□ 0.01
TSPAN3-210ENST00000561277 SUB1P53999 127 aaKnown RBP eCLIP15.12■□□□□ 0.014e-13■■■■■ 56.5
TSPAN3-210ENST00000561277 C11orf87Q6NUJ2 197 aa15.12■□□□□ 0.01
TSPAN3-210ENST00000561277 ADAMTSL5Q6ZMM2 481 aa15.12■□□□□ 0.01
TSPAN3-210ENST00000561277 LINC00299Q6ZSB3 139 aa15.12■□□□□ 0.01
TSPAN3-210ENST00000561277 HEYLQ9NQ87 328 aaPredicted RBP15.12■□□□□ 0.01
TSPAN3-210ENST00000561277 PIGBOS1A0A0B4J2F0 54 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 LYRM1O43325 122 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 FOLR2P14207 255 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 MFAP4P55083 255 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 DCTN2Q13561 401 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 SPSB3Q6PJ21 355 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 S100ZQ8WXG8 99 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 ATP6V0BQ99437 205 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 BATF3Q9NR55 127 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 SELENOKQ9Y6D0 94 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 DUXBA0A1W2PPF3 345 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 TMEM213A2RRL7 107 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 A8MWP6 167 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 ANXA7P20073 488 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 UBE2MP61081 183 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 LRTM2Q8N967 370 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 OR1S1Q8NH92 325 aa15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 LSM4Q9Y4Z0 139 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-210ENST00000561277 C9orf170A2RU37 121 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 IZUMO1RA6ND01 250 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 CORTO00230 105 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 NUPL2O15504 423 aaKnown RBP15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 ADMP35318 185 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 OPRK1P41145 380 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 HTR2BP41595 481 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 TNFRSF9Q07011 255 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 BSXQ3C1V8 233 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 TM4SF20Q53R12 229 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 LCN12Q6JVE5 192 aa15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 ZNF436Q9C0F3 470 aaPredicted RBP15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 GAR1Q9NY12 217 aaKnown RBP15.1■□□□□ 0.01
TSPAN3-210ENST00000561277 IGHV3OR16-8A0A075B7F1 116 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 A0A1B0GU03 582 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 GNG7O60262 68 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 CTSGP08311 255 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 HOXB5P09067 269 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 OR4E1P0C645 316 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 CBLN1P23435 193 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 CD300EQ496F6 205 aaPredicted RBP15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 C4orf46Q504U0 113 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 SLC24A4Q8NFF2 622 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 TMEM190Q8WZ59 177 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 HIPK2Q9H2X6 1198 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 PALMDQ9NP74 551 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 HSPB7Q9UBY9 170 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 CACFD1Q9UGQ2 172 aa15.09■□□□□ 0.01
TSPAN3-210ENST00000561277 DHRS2Q13268 280 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 PVRIGQ6DKI7 326 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 TXN2Q99757 166 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 C20orf24Q9BUV8 137 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 C20orf85Q9H1P6 137 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 RBKSQ9H477 322 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 UFC1Q9Y3C8 167 aa15.08■□□□□ 0
TSPAN3-210ENST00000561277 FCGR2BP31994 310 aaPredicted RBP15.07■□□□□ 0
TSPAN3-210ENST00000561277 CD69Q07108 199 aa15.07■□□□□ 0
TSPAN3-210ENST00000561277 UXS1Q8NBZ7 420 aa15.07■□□□□ 0
TSPAN3-210ENST00000561277 DUSP18Q8NEJ0 188 aa15.07■□□□□ 0
TSPAN3-210ENST00000561277 DTD1Q8TEA8 209 aa15.07■□□□□ 0
TSPAN3-210ENST00000561277 FNDC4Q9H6D8 234 aaPredicted RBP15.07■□□□□ 0
TSPAN3-210ENST00000561277 TMED3Q9Y3Q3 217 aa15.07■□□□□ 0
TSPAN3-210ENST00000561277 SMAD5-AS1Q9Y6J3 95 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms