RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 APOA1P02647 267 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 PGAM2P15259 253 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 CEMP1Q6PRD7 247 aaPredicted RBP19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 FUNDC2Q9BWH2 189 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 SCPEP1Q9HB40 452 aa19.95■□□□□ 0.78
SNRPA1-215ENST00000561187 NXF2Q9GZY0 626 aaKnown RBP19.94■□□□□ 0.78
SNRPA1-215ENST00000561187 TRAV14DV4A0A0A6YYC5 116 aa19.93■□□□□ 0.78
SNRPA1-215ENST00000561187 ZNF114Q8NC26 417 aa19.93■□□□□ 0.78
SNRPA1-215ENST00000561187 OR10C1Q96KK4 312 aa19.93■□□□□ 0.78
SNRPA1-215ENST00000561187 C6orf62Q9GZU0 229 aaPredicted RBP19.93■□□□□ 0.78
SNRPA1-215ENST00000561187 FAM25AB3EWG3 89 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 FAM25CB3EWG5 89 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 FAM25GB3EWG6 89 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 TNFAIP8O95379 198 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 PPP5CP53041 499 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 HSPE1P61604 102 aaKnown RBP19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 TCF24Q7RTU0 167 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 ST8SIA2Q92186 375 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 CMTM3Q96MX0 182 aa19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 FAM212BQ9NTI7 297 aaPredicted RBP19.92■□□□□ 0.78
SNRPA1-215ENST00000561187 APOHP02749 345 aaPredicted RBP19.91■□□□□ 0.78
SNRPA1-215ENST00000561187 AKR1C2P52895 323 aa19.91■□□□□ 0.78
SNRPA1-215ENST00000561187 ERHP84090 104 aaKnown RBP19.91■□□□□ 0.78
SNRPA1-215ENST00000561187 SLC35G3Q8N808 338 aa19.91■□□□□ 0.78
SNRPA1-215ENST00000561187 IGKV1-5P01602 117 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 UCP3P55916 312 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 TOMM20LQ6UXN7 152 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 TP53RKQ96S44 253 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 TXN2Q99757 166 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 CSTL1Q9H114 145 aa19.9■□□□□ 0.78
SNRPA1-215ENST00000561187 ST8SIA3O43173 380 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 PIGPP57054 158 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 LEMD1Q68G75 181 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 LILRB2Q8N423 598 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 TMEM217Q8N7C4 229 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 PHLDA1Q8WV24 401 aaPredicted RBP19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 GINS3Q9BRX5 216 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 KLK11Q9UBX7 282 aa19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 KLK5Q9Y337 293 aaPredicted RBP19.89■□□□□ 0.77
SNRPA1-215ENST00000561187 MPTX1A8MV57 137 aa19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 IFNA17P01571 189 aa19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 RPL11P62913 178 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 RNASE10Q5GAN6 216 aaKnown RBP19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 FAM90A2PQ658T7 463 aa19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 PUS1Q9Y606 427 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNRPA1-215ENST00000561187 CD3DP04234 171 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 SNCAP37840 140 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 HOXA1P49639 335 aaPredicted RBP19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 SP6Q3SY56 376 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 RPP25LQ8N5L8 163 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 FAM24BQ8N5W8 94 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 DUSP18Q8NEJ0 188 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 OR52I2Q8NH67 350 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 RARRES2Q99969 163 aa19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 NAA50Q9GZZ1 169 aaKnown RBP19.87■□□□□ 0.77
SNRPA1-215ENST00000561187 A0A0B4J293 547 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 DNASE2O00115 360 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 DEFB4AO15263 64 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 DEDDO75618 318 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 DFFBO76075 338 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 CA1P00915 261 aaPredicted RBP19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 NANOS2P60321 138 aaKnown RBP19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 TRIM16LQ309B1 348 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 MS4A6AQ9H2W1 248 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 ZFAND3Q9H8U3 227 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 FBXL17Q9UF56 701 aa19.86■□□□□ 0.77
SNRPA1-215ENST00000561187 ETV6P41212 452 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 NPBWR1P48145 328 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 RORCP51449 518 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 DEFB131AP59861 70 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 RND3P61587 244 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 PAFAH1B2P68402 229 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 OR4D10Q8NGI6 311 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 OR11H2Q8NH07 326 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 PDCD10Q9BUL8 212 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 MRPL36Q9P0J6 103 aaKnown RBP19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 EXTL2Q9UBQ6 330 aa19.85■□□□□ 0.77
SNRPA1-215ENST00000561187 A0A0G2JRQ6 117 aa19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 A0A1B0GU03 582 aa19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 ZNF600Q6ZNG1 722 aa19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 LHFPL1Q86WI0 220 aa19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 RNASE11Q8TAA1 199 aaKnown RBP19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 RABAC1Q9UI14 185 aa19.84■□□□□ 0.77
SNRPA1-215ENST00000561187 C3orf85A0A1B0GTC6 90 aa19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 P0C879 139 aa19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 RNASE2P10153 161 aaKnown RBP19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 SCGB2B2Q4G0G5 96 aa19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 VSIRQ9H7M9 311 aa19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 COPZ2Q9P299 210 aa19.83■□□□□ 0.77
SNRPA1-215ENST00000561187 ATF4P18848 351 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 OPRK1P41145 380 aa19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 CMC4P56277 68 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 MZT2AQ6P582 158 aa19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 GATAD1Q8WUU5 269 aa19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 ZNF486Q96H40 463 aaPredicted RBP19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 ENY2Q9NPA8 101 aa19.82■□□□□ 0.76
SNRPA1-215ENST00000561187 TMEM50AO95807 157 aa19.81■□□□□ 0.76
SNRPA1-215ENST00000561187 MLANAQ16655 118 aa19.81■□□□□ 0.76
SNRPA1-215ENST00000561187 OR13C8Q8NGS7 320 aa19.81■□□□□ 0.76
SNRPA1-215ENST00000561187 FNDC4Q9H6D8 234 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms