RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 RASL11BQ9BPW5 248 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 PXMP4Q9Y6I8 212 aa13.6□□□□□ -0.23
HDDC3-206ENST00000561036 MED13LQ71F56 2210 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 IGHV3OR16-10A0A075B7F0 116 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 A0A0U1RQK1 487 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 SEC14L6B5MCN3 397 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 IGHV4-31P0DP07 118 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 CTRB1P17538 263 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 CX3CL1P78423 397 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 PMS2P11Q13670 270 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 CTRB2Q6GPI1 263 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 KRTAP1-3Q8IUG1 177 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
HDDC3-206ENST00000561036 SLC39A9Q9NUM3 307 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
HDDC3-206ENST00000561036 TMEM218A2RU14 115 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 NPIPB5A8MRT5 1133 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 TGFAP01135 160 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 FBP1P09467 338 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 MFAP2P55001 183 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 PRR20EP86478 221 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 PRR20CP86479 221 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 PRR20DP86480 221 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 PRR20BP86481 221 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 PRR20AP86496 221 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 GUK1Q16774 197 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 TMEM249Q2WGJ8 235 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 KLF17Q5JT82 389 aaPredicted RBP13.58□□□□□ -0.24
HDDC3-206ENST00000561036 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 THAP8Q8NA92 274 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 C22orf15Q8WYQ4 148 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 Q96MF0 132 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 LINC00052Q96N35 136 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 RBM14Q96PK6 669 aaKnown RBP13.58□□□□□ -0.24
HDDC3-206ENST00000561036 SCRT1Q9BWW7 348 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 FNDC4Q9H6D8 234 aaPredicted RBP13.58□□□□□ -0.24
HDDC3-206ENST00000561036 TREM1Q9NP99 234 aa13.58□□□□□ -0.24
HDDC3-206ENST00000561036 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 YIF1AO95070 293 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 B2MP61769 119 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 MIC13Q5XKP0 118 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 STPG3Q8N7X2 389 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 MISP3Q96FF7 219 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
HDDC3-206ENST00000561036 C19orf24Q9BVV8 132 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 WNT10AQ9GZT5 417 aa13.57□□□□□ -0.24
HDDC3-206ENST00000561036 UTP20O75691 2785 aaKnown RBP13.56□□□□□ -0.24
HDDC3-206ENST00000561036 AVPP01185 164 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 CCL20P78556 96 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 SRSF3P84103 164 aaKnown RBP13.56□□□□□ -0.24
HDDC3-206ENST00000561036 MLANAQ16655 118 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 LCN15Q6UWW0 184 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 TTC9CQ8N5M4 171 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 OR2T6Q8NHC8 308 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 RAB24Q969Q5 203 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 ACY3Q96HD9 319 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 MOB4Q9Y3A3 225 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 FBN2P35556 2912 aa13.56□□□□□ -0.24
HDDC3-206ENST00000561036 IGKV1OR2-108A0A075B7D4 117 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 IGHV7-81A0A0B4J1V7 117 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 RBFOX3A6NFN3 312 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 LINC00869P0C866 280 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 DEFA4P12838 97 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 OR10J1P30954 320 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 CDC34P49427 236 aaPredicted RBP13.55□□□□□ -0.24
HDDC3-206ENST00000561036 SELENOTP62341 195 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 CYB5R2Q6BCY4 276 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 FAM122CQ6P4D5 195 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 CYP2G1PQ6ZSU1 146 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 TMEM116Q8NCL8 245 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 NPIPB3Q92617 1050 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 TMEM68Q96MH6 324 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 SSX3Q99909 188 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 SLC25A33Q9BSK2 321 aa13.55□□□□□ -0.24
HDDC3-206ENST00000561036 EIF5A2Q9GZV4 153 aaKnown RBP13.55□□□□□ -0.24
HDDC3-206ENST00000561036 A0A1B0GV50 99 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 A0A1W2PPV4 95 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 IFNA1P01562 189 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 APELAP0DMC3 54 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 TAGLN2P37802 199 aaKnown RBP13.54□□□□□ -0.24
HDDC3-206ENST00000561036 RHOBP62745 196 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 ZNF506Q5JVG8 444 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 C10orf91Q5T1B1 145 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 HIST2H2BCQ6DN03 193 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 SSX7Q7RTT5 188 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 C5orf56Q8N8D9 126 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 TRGV9Q99603 122 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 SLC25A22Q9H936 323 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 DMRT1Q9Y5R6 373 aa13.54□□□□□ -0.24
HDDC3-206ENST00000561036 ANKRD17O75179 2603 aaKnown RBP13.53□□□□□ -0.24
HDDC3-206ENST00000561036 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 I3L2K1 104 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 MT-CO2P00403 227 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 FSHBP01225 129 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms