RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 WBP1Q96G27 269 aa11.07□□□□□ -0.64
CSPG4P11-201ENST00000560634 ST20Q9HBF5 79 aa11.07□□□□□ -0.64
CSPG4P11-201ENST00000560634 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 DPM2O94777 84 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 SIGLEC12Q96PQ1 595 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 GNB1LQ9BYB4 327 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 SAA1P0DJI8 122 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 ATP1A1-AS1Q5TC04 95 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 NBR2O15453 112 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 DUSP14O95147 198 aaKnown RBP11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 NDUFA3O95167 84 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 CCL1P22362 96 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 IMMP1LQ96LU5 166 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 TMEM242Q9NWH2 141 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 SLC25A20O43772 301 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 CLEC19AQ6UXS0 136 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 NR2C2APQ86WQ0 139 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 ITLN2Q8WWU7 325 aaPredicted RBP11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 PGPEP1Q9NXJ5 209 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 WDR83OSQ9Y284 106 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 LY75O60449 1722 aa11.06□□□□□ -0.64
CSPG4P11-201ENST00000560634 GATA2P23769 480 aaPredicted RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 PLNP26678 52 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 LINC01587Q99440 93 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 TRAV21A0A0B4J279 112 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 UBE2CO00762 179 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 RNF125Q96EQ8 232 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 PEMTQ9UBM1 199 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 MUC21A0A0G2JKD1 596 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 MUC21A0A140T8X8 626 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 TCRBV4S1A1TA0A5B7 111 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 LY6G6FQ5SQ64 297 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 MUC21Q5SSG8 566 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 PLPPR1Q8TBJ4 325 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 CHCHD1Q96BP2 118 aaKnown RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 RNASE7Q9H1E1 156 aaKnown RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 NHP2Q9NX24 153 aaKnown RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 SPTBN1Q01082 2364 aaKnown RBP11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 SHANK3Q9BYB0 1731 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 C1QTNF9P0C862 333 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 TDGF1P13385 188 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 ZNF585BQ52M93 769 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 COQ2Q96H96 371 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 S4R3C0 116 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 KIAA1217Q5T5P2 1943 aa11.05□□□□□ -0.64
CSPG4P11-201ENST00000560634 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 CELA3AP09093 270 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 BTCP35070 178 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 SEC11AP67812 179 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 ATP5L2Q7Z4Y8 100 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 FAM57AQ8TBR7 257 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 ZNF646O15015 1829 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 TRGV2A0A075B6R0 118 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 NDUFS8O00217 210 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 RNASE4P34096 147 aaKnown RBP11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 FAM166AQ6J272 317 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 VKORC1Q9BQB6 163 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 SMPXQ9UHP9 88 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 PSG8Q9UQ74 426 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BKO60814 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BJP06899 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BOP23527 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BBP33778 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 ADMP35318 185 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BDP58876 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BCP62807 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST2H2BEQ16778 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 FAM201AQ5SY85 155 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 FAM71F2Q6NXP2 309 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BHQ93079 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BNQ99877 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 HIST1H2BMQ99879 126 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 F2Z2F3 143 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 FBLN7Q53RD9 439 aa11.04□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGLV3-12A0A075B6K2 115 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGKV1D-13A0A0B4J2D9 117 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 NAPSAO96009 420 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGKV1-13P0DP09 117 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 IGHV1-2P23083 117 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 ZNF124Q15973 351 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 MORN2Q502X0 79 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 SAA2-SAA4A0A096LPE2 208 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 SAA2P0DJI9 122 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 BSPH1Q075Z2 132 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 ZNF497Q6ZNH5 498 aa11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
CSPG4P11-201ENST00000560634 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms