RNA–Protein interactions for RNA: ENST00000560518.1

CERNA1-202, Transcript of competing endogenous lncRNA 1 for miR-4707-5p and miR-4767, humanhuman

TSL 2 BASIC

Gene CERNA1, Length 1,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CERNA1-202ENST00000560518 ARV1Q9H2C2 271 aa12.52□□□□□ -0.4
CERNA1-202ENST00000560518 TMEM160Q9NX00 188 aa12.52□□□□□ -0.4
CERNA1-202ENST00000560518 UBQLN2Q9UHD9 624 aa12.52□□□□□ -0.4
CERNA1-202ENST00000560518 F11RQ9Y624 299 aaKnown RBP12.52□□□□□ -0.4
CERNA1-202ENST00000560518 RFNGQ9Y644 331 aa12.52□□□□□ -0.4
CERNA1-202ENST00000560518 UBE2L5PA0A1B0GUS4 154 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
CERNA1-202ENST00000560518 C9orf152Q5JTZ5 239 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 Q71RC1 249 aaPredicted RBP12.52□□□□□ -0.41
CERNA1-202ENST00000560518 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 UQCC1Q9NVA1 299 aa12.52□□□□□ -0.41
CERNA1-202ENST00000560518 FBXO24O75426 580 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 PRH1P02810 166 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 CRYGCP07315 174 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 RUNX1Q01196 453 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 ATP6V1FQ16864 119 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 TMED6Q8WW62 240 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 GINS3Q9BRX5 216 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 TMEM147Q9BVK8 224 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 SH3BGRL3Q9H299 93 aa12.51□□□□□ -0.41
CERNA1-202ENST00000560518 G3V318 75 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 SCAF4O95104 1147 aaKnown RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 TTC9CQ8N5M4 171 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 OR5T1Q8NG75 326 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 PCNPQ8WW12 178 aaKnown RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 FNDC4Q9H6D8 234 aaPredicted RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 MTORP42345 2549 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 HIVEP2P31629 2446 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 NPIPB5A8MRT5 1133 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 IFNA5P01569 189 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 IGHV3-48P01763 117 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 DEFA4P12838 97 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 ATP6V0CP27449 155 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 EIF5AP63241 154 aaKnown RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 DLK1P80370 383 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 CD69Q07108 199 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 ECSCRQ19T08 205 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 RNASEH2CQ8TDP1 164 aaKnown RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 MISP3Q96FF7 219 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 GSX1Q9H4S2 264 aaPredicted RBP12.5□□□□□ -0.41
CERNA1-202ENST00000560518 LINC00527Q9UJ94 153 aa12.5□□□□□ -0.41
CERNA1-202ENST00000560518 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 IGHG2P01859 326 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 FOSL1P15407 271 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 MDKP21741 143 aaPredicted RBP12.49□□□□□ -0.41
CERNA1-202ENST00000560518 OPRK1P41145 380 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 SLC25A24Q6NUK1 477 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 SLC25A32Q9H2D1 315 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 TREML4Q6UXN2 200 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 OR2T6Q8NHC8 308 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 SCARB1Q8WTV0 552 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 PHYHIPLQ96FC7 376 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 RSG1Q9BU20 258 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 PLA2G2EQ9NZK7 142 aa12.49□□□□□ -0.41
CERNA1-202ENST00000560518 IGHV3-21A0A0B4J1V1 117 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 SPP1P10451 314 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 GAMTQ14353 236 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 AKIRIN2Q53H80 203 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 SLC35E3Q7Z769 313 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 SCGB1C1Q8TD33 95 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 TAF15Q92804 592 aaKnown RBP eCLIP12.48□□□□□ -0.41
CERNA1-202ENST00000560518 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
CERNA1-202ENST00000560518 MRPL36Q9P0J6 103 aaKnown RBP12.48□□□□□ -0.41
CERNA1-202ENST00000560518 IGF1P05019 195 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 SRD5A1P18405 259 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 GPX4P36969 197 aaPredicted RBP12.47□□□□□ -0.41
CERNA1-202ENST00000560518 RBMS3Q6XE24 437 aaKnown RBP12.47□□□□□ -0.41
CERNA1-202ENST00000560518 SLC16A13Q7RTY0 426 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 NOL4LQ96MY1 436 aaPredicted RBP12.47□□□□□ -0.41
CERNA1-202ENST00000560518 PARD6GQ9BYG4 376 aaPredicted RBP12.47□□□□□ -0.41
CERNA1-202ENST00000560518 WDR83OSQ9Y284 106 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 FGF7P21781 194 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 C19orf54Q5BKX5 351 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 ESM1Q9NQ30 184 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 CDC42EP3Q9UKI2 254 aa12.47□□□□□ -0.41
CERNA1-202ENST00000560518 IGLV11-55A0A075B6I3 123 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 TRAV41A0A0B4J266 112 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 I3L2K1 104 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 CORTO00230 105 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 SOX15O60248 233 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 MT-CO2P00403 227 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 SEC11BP0C7V7 166 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
CERNA1-202ENST00000560518 AKR1C1Q04828 323 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 TMEM95Q3KNT9 176 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 CLLU1Q5K131 121 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 TMEM86BQ8N661 226 aa12.46□□□□□ -0.41
CERNA1-202ENST00000560518 FAM110DQ8TAY7 271 aaPredicted RBP12.46□□□□□ -0.41
CERNA1-202ENST00000560518 LSM4Q9Y4Z0 139 aaKnown RBP12.46□□□□□ -0.41
CERNA1-202ENST00000560518 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms