RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 C8orf88P0DMB2 117 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 IGHV4-30-4P0DP06 118 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 EDN2P20800 178 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 CBLN1P23435 193 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 FAUP35544 74 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 ELLP55199 621 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 CD300EQ496F6 205 aaPredicted RBP11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 Q6ZRM9 215 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 SGPP2Q8IWX5 399 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 SELENOHQ8IZQ5 122 aaKnown RBP11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 C19orf73Q9NVV2 129 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 MCUBQ9NWR8 336 aa11.46□□□□□ -0.57
SNRPA1-210ENST00000560383 ZNF320A2RRD8 509 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 OR2T8A6NH00 312 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 ADMP35318 185 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 TMEM187Q14656 261 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 CASC10Q5T4H9 136 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 TOMM5Q8N4H5 51 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 OR52E5Q8NH55 327 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 TMEM190Q8WZ59 177 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 IL22RA2Q969J5 263 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 PALMDQ9NP74 551 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 STARD9Q9P2P6 4700 aa11.45□□□□□ -0.58
SNRPA1-210ENST00000560383 ZNF785A8K8V0 405 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 IFNA17P01571 189 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 CTSGP08311 255 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 SUPT4H1P63272 117 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 SLC35G3Q8N808 338 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 DYNLRB2Q8TF09 96 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 MARC2Q969Z3 335 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 ZNF414Q96IQ9 312 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 CITED4Q96RK1 184 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 TXN2Q99757 166 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 CHRDL1Q9BU40 450 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 SRRQ9GZT4 340 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 GAR1Q9NY12 217 aaKnown RBP11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 NDUFA13Q9P0J0 144 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 KCNIP3Q9Y2W7 256 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 UFC1Q9Y3C8 167 aa11.44□□□□□ -0.58
SNRPA1-210ENST00000560383 SACSQ9NZJ4 4579 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 IGHV3-21A0A0B4J1V1 117 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 NDUFA4O00483 81 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 MT-CO2P00403 227 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 SPCS3P61009 180 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 BSXQ3C1V8 233 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 TM4SF20Q53R12 229 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 SPINK9Q5DT21 86 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 TMEM268Q5VZI3 342 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 UXS1Q8NBZ7 420 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 RNASE11Q8TAA1 199 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 CACNG8Q8WXS5 425 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 GPR146Q96CH1 333 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 PDCD10Q9BUL8 212 aa11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 MRPL27Q9P0M9 148 aaKnown RBP11.43□□□□□ -0.58
SNRPA1-210ENST00000560383 IGHV3-35A0A0C4DH35 117 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 SNCAP37840 140 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 MFAP4P55083 255 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 Q56UQ5 140 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 GTSCR1Q86UQ5 136 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 MISP3Q96FF7 219 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 SLC25A21Q9BQT8 299 aaPredicted RBP11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 CACFD1Q9UGQ2 172 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 MLXQ9UH92 298 aa11.42□□□□□ -0.58
SNRPA1-210ENST00000560383 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 K7EMT4 169 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 LYL1P12980 280 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 AKR1C4P17516 323 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 SUB1P53999 127 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 SRPXP78539 464 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 NMSQ5H8A3 153 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 ZNF57Q68EA5 555 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 TMEM61Q8N0U2 210 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 DAZ1Q9NQZ3 744 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 CACNG5Q9UF02 275 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
SNRPA1-210ENST00000560383 TRAV25A0A0B4J276 109 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 CORTO00230 105 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 HOXA1P49639 335 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 BAK1Q16611 211 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 UBAC2Q8NBM4 344 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 WDR89Q96FK6 387 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 SPATA25Q9BR10 227 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 ENY2Q9NPA8 101 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 PRR13Q9NZ81 148 aa11.4□□□□□ -0.58
SNRPA1-210ENST00000560383 PIGBOS1A0A0B4J2F0 54 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 NUPL2O15504 423 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 SULT1A3P0DMM9 295 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 SULT1A4P0DMN0 295 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 ANXA3P12429 323 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 CD81P60033 236 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 RELQ04864 619 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 BTNL8Q6UX41 500 aa11.39□□□□□ -0.59
SNRPA1-210ENST00000560383 LGI3Q8N145 548 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms