RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 GPM6AP51674 278 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 EDDM3BP56851 147 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 MLF1P58340 268 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF146Q15072 292 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 EFNB3Q15768 340 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 TNXAQ16473 311 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 CEACAM16Q2WEN9 425 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 MPV17L2Q567V2 206 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 PSMG4Q5JS54 123 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 PRSS57Q6UWY2 283 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 NEGR1Q7Z3B1 354 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 ABHD3Q8WU67 409 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 GLMPQ8WWB7 406 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 POM121L2Q96KW2 1035 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 MRPL32Q9BYC8 188 aaKnown RBP4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 DEFB126Q9BYW3 111 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 TNFRSF19Q9NS68 423 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 FGF21Q9NSA1 209 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 TECRQ9NZ01 308 aaKnown RBP4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 IL36RNQ9UBH0 155 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 WASHC3Q9Y3C0 194 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 FER1L5A0AVI2 2057 aa4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 GOLGB1Q14789 3259 aaKnown RBP4.88□□□□□ -1.63
SNRPA1-209ENST00000560307 IGKV3D-15A0A087WSY6 115 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 IGHV3-20A0A0C4DH32 117 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A1B0GXF2 115 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A1W2PR77 199 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 A6NDN8 102 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 OR2T8A6NH00 312 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 K7EP34 96 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 SIVA1O15304 175 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 SYNGR1O43759 233 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 NUDT3O95989 172 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 IGLV2-8P01709 118 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 LIPFP07098 398 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 CA3P07451 260 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 COX8AP10176 69 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 B4GALT1P15291 398 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 DUTP33316 252 aaKnown RBP4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 SSTR5P35346 364 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 ERVK11-1P61568 191 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 BEAN1Q3B7T3 259 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 Q56UQ5 140 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 FAM120AOSQ5T036 256 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 AMMECR1LQ6DCA0 310 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 PARM1Q6UWI2 310 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 Q6ZSN1 163 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 SPATA12Q7Z6I5 190 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 OR1N2Q8NGR9 330 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 OR2Y1Q8NGV0 311 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 Q8TCH9 128 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 IL1F10Q8WWZ1 152 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 NEUROG1Q92886 237 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 GALMQ96C23 342 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 RTL8AQ9BWD3 113 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 SRXN1Q9BYN0 137 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 PEMTQ9UBM1 199 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 HSPB8Q9UJY1 196 aa4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 TDRD6O60522 2096 aaKnown RBP4.87□□□□□ -1.63
SNRPA1-209ENST00000560307 EML6Q6ZMW3 1958 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 IGHV3-15A0A0B4J1V0 119 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 MUC21A0A0G2JKD1 596 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 MUC21A0A140T8X8 626 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 A0A1B0GV72 72 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 FAM231BA6NCW3 169 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 C17orf98A8MV24 154 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 M0R296 226 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 HSPB6O14558 160 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 OR2H2O95918 312 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 HIST1H1EP10412 219 aaKnown RBP4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 CD27P26842 260 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 GPR183P32249 361 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 CA7P43166 264 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 B3GALT5-AS1P59052 145 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 ERVK-16P61578 105 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 RPL30P62888 115 aaKnown RBP4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 TFF2Q03403 129 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 ZNF816Q0VGE8 651 aaPredicted RBP4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 SLAQ13239 276 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 OR1C1Q15619 314 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 GABRA6Q16445 453 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 KIAA1644Q3SXP7 199 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 GCSAMLQ5JQS6 135 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 MUC21Q5SSG8 566 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 SAMD13Q5VXD3 122 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 MIC13Q5XKP0 118 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 LCN12Q6JVE5 192 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 Q6ZVH6 145 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 ATOH7Q8N100 152 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 FAM19A2Q8N3H0 131 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 OR1B1Q8NGR6 318 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 FGFBP3Q8TAT2 258 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 PERPQ96FX8 193 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 C5orf30Q96GV9 206 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 GUCD1Q96NT3 240 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 AP1S3Q96PC3 154 aa4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 CDX2Q99626 313 aaPredicted RBP4.86□□□□□ -1.63
SNRPA1-209ENST00000560307 MAP1LC3CQ9BXW4 147 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms