RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SOX15O60248 233 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 ACTL6BO94805 426 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 FGF2P09038 288 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 METTL15P1P0C7V9 234 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 OR13C7P0DN81 318 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 SLC25A6P12236 298 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 CXCL2P19875 107 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 PSMB6P28072 239 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 EIF2B2P49770 351 aaKnown RBP4.08□□□□□ -1.76
SPG11-220ENST00000559933 AP2S1P53680 142 aaPredicted RBP4.08□□□□□ -1.76
SPG11-220ENST00000559933 RAP2BP61225 183 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 HSPE1P61604 102 aaKnown RBP4.08□□□□□ -1.76
SPG11-220ENST00000559933 AARDQ4LEZ3 155 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 GAGE13Q4V321 117 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 SPANXN5Q5MJ07 72 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 OR8G2PQ6IF36 304 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 UNQ5815/PRO19632Q6UWF5 114 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 RBMS3Q6XE24 437 aaKnown RBP4.08□□□□□ -1.76
SPG11-220ENST00000559933 Q6ZSV7 163 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 SLC35E3Q7Z769 313 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 ZNF329Q86UD4 541 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 HAPLN4Q86UW8 402 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 ZNF429Q86V71 674 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 PRIMA1Q86XR5 153 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 MMD2Q8IY49 270 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 TCTE3Q8IZS6 198 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 TEX29Q8N6K0 151 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 OR8H1Q8NGG4 311 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 OR1L8Q8NGR8 309 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 OR5B3Q8NH48 314 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 CLUHP3Q96NS8 147 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 P2RX4Q99571 388 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 RNF5Q99942 180 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 SMIM3Q9BZL3 60 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 COMMD5Q9GZQ3 224 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 PLEKHA3Q9HB20 300 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 COA4Q9NYJ1 87 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 PSENENQ9NZ42 101 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 C1RLQ9NZP8 487 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 MRPL36Q9P0J6 103 aaKnown RBP4.08□□□□□ -1.76
SPG11-220ENST00000559933 PITPNC1Q9UKF7 332 aa4.08□□□□□ -1.76
SPG11-220ENST00000559933 NIPBLQ6KC79 2804 aaeCLIP4.08□□□□□ -1.76
SPG11-220ENST00000559933 JMJD1CQ15652 2540 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 A0A1W2PN81 502 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 RNF222A6NCQ9 220 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 TRIM77I1YAP6 450 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 L7N2F9 121 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 TCF21O43680 179 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 CST7O76096 145 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 IFNA10P01566 189 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 IGHG2P01859 326 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 HKR1P10072 659 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 RNASE2P10153 161 aaKnown RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 CHRNA7P36544 502 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 CAV2P51636 162 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 SPCS3P61009 180 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 VAMP2P63027 116 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 ZFP69Q49AA0 526 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 PDLIM3Q53GG5 364 aaPredicted RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 PRSS54Q6PEW0 395 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 ZNF562Q6V9R5 426 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 C18orf65Q6ZTR6 163 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 OR2C3Q8N628 320 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 TMEM217Q8N7C4 229 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 SLC24A4Q8NFF2 622 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 OR52E5Q8NH55 327 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 ZNF418Q8TF45 676 aaPredicted RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 PINX1Q96BK5 328 aaKnown RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 MS4A10Q96PG2 267 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 NPFFR1Q9GZQ6 430 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 ENY2Q9NPA8 101 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 HEYLQ9NQ87 328 aaPredicted RBP4.07□□□□□ -1.76
SPG11-220ENST00000559933 ZC4H2Q9NQZ6 224 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 ZNF257Q9Y2Q1 563 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 RFNGQ9Y644 331 aa4.07□□□□□ -1.76
SPG11-220ENST00000559933 TRAV41A0A0B4J266 112 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 MFSD2BA6NFX1 497 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 PMS2P5A8MQ11 134 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 FAM90A26D6RGX4 464 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 OR2J3O76001 311 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 NDUFB8O95169 186 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 C1QBP02746 253 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 OR8U8P0C7N1 319 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 SLC25A4P12235 298 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 LYL1P12980 280 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 CTRB1P17538 263 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 MDKP21741 143 aaPredicted RBP4.06□□□□□ -1.76
SPG11-220ENST00000559933 NPY1RP25929 384 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 MAS1LP35410 378 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 KRTAP10-3P60369 221 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 CYCSP99999 105 aaKnown RBP4.06□□□□□ -1.76
SPG11-220ENST00000559933 EWSR1Q01844 656 aaKnown RBP eCLIP4.06□□□□□ -1.76
SPG11-220ENST00000559933 NHLH2Q02577 135 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 CLINT1Q14677 625 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 BSXQ3C1V8 233 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms