RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 SMCO3A2RU48 225 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 OR5T1Q8NG75 326 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 MISP3Q96FF7 219 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 GINS3Q9BRX5 216 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 TMEM147Q9BVK8 224 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 WNT10AQ9GZT5 417 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 SLC25A32Q9H2D1 315 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 UQCC1Q9NVA1 299 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 PITPNC1Q9UKF7 332 aa13.63□□□□□ -0.23
CHRNA3-206ENST00000559658 BORCS7-ASMTA0A0B4J1R7 106 aa13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 ZNF266Q14584 549 aa13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 PVRIGQ6DKI7 326 aa13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 OR2T6Q8NHC8 308 aa13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 SGMS2Q8NHU3 365 aa13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 NOL4LQ96MY1 436 aaPredicted RBP13.62□□□□□ -0.23
CHRNA3-206ENST00000559658 DFFBO76075 338 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 MDKP21741 143 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 TREML4Q6UXN2 200 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 OR1P1Q8NH06 330 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 WDR61Q9GZS3 305 aaKnown RBP13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 ESM1Q9NQ30 184 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 S4R3C0 116 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 IGKV1OR2-108A0A075B7D4 117 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 SOX15O60248 233 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 CD99P14209 185 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 OPRK1P41145 380 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 CD69Q07108 199 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 UNQ5815/PRO19632Q6UWF5 114 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 SLC16A13Q7RTY0 426 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 OR5R1Q8NH85 324 aa13.61□□□□□ -0.23
CHRNA3-206ENST00000559658 F8P00451 2351 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 CRYGCP07315 174 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 SPP1P10451 314 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 FGF7P21781 194 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 DLK1P80370 383 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 GAMTQ14353 236 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 SCARB1Q8WTV0 552 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 FANCD2OSQ96PS1 177 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 SRSF8Q9BRL6 282 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 UBQLN2Q9UHD9 624 aa13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 FN1P02751 2386 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-206ENST00000559658 RPS10-NUDT3A0A1W2PQS6 291 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 IFNA7P01567 189 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 C19orf54Q5BKX5 351 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 TTC9CQ8N5M4 171 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 WDR83OSQ9Y284 106 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 BTBD17A6NE02 478 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 DNAJC9-AS1A6NH13 148 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 INAFM1C9JVW0 142 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 IFNA5P01569 189 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 IGHG2P01859 326 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 DEFA4P12838 97 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 AKR1C1Q04828 323 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 BTNL8Q6UX41 500 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 TMEM182Q6ZP80 229 aaPredicted RBP13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 ZNF767PQ75MW2 155 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 C16orf82Q7Z2V1 217 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 MRPL41Q8IXM3 137 aaKnown RBP13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 ACY3Q96HD9 319 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 MGST2Q99735 147 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 NPCDR1Q9BY65 106 aa13.59□□□□□ -0.23
CHRNA3-206ENST00000559658 IGLV11-55A0A075B6I3 123 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 MT-CO2P00403 227 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 FHITP49789 147 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 ATP6V1FQ16864 119 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 RNASEH2CQ8TDP1 164 aaKnown RBP13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 LSM4Q9Y4Z0 139 aaKnown RBP13.58□□□□□ -0.24
CHRNA3-206ENST00000559658 I3L2K1 104 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 K7EIM0 57 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 M0QZK8 103 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 FAM157CP0CG43 387 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 HNF1AP20823 631 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 TEX29Q8N6K0 151 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 PHYHIPLQ96FC7 376 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 TMEM160Q9NX00 188 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 TRAV41A0A0B4J266 112 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 MFSD2BA6NFX1 497 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 TEX46H3BTG2 121 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 ATP5IP56385 69 aaPredicted RBP13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 OR2G3Q8NGZ4 309 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 FAM110DQ8TAY7 271 aaPredicted RBP13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 GGACTQ9BVM4 153 aa13.57□□□□□ -0.24
CHRNA3-206ENST00000559658 EIF3GO75821 320 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 OR2J3O76001 311 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 IGHV3-23P01764 117 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 NMBP08949 121 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 SRD5A1P18405 259 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 RND2P52198 227 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 ELLP55199 621 aaPredicted RBP13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 NPIPB3Q92617 1050 aa13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 PARD6GQ9BYG4 376 aaPredicted RBP13.56□□□□□ -0.24
CHRNA3-206ENST00000559658 ZNF702PQ9H963 129 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms