RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SLC35G3Q8N808 338 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 UBAC2Q8NBM4 344 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 RNASE11Q8TAA1 199 aaKnown RBP8.25□□□□□ -1.09
SPG11-216ENST00000559347 GLYATL2Q8WU03 294 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 TMEM230Q96A57 120 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 WDR89Q96FK6 387 aaPredicted RBP8.25□□□□□ -1.09
SPG11-216ENST00000559347 ZNF414Q96IQ9 312 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 PALMDQ9NP74 551 aa8.25□□□□□ -1.09
SPG11-216ENST00000559347 CSMD3Q7Z407 3707 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 TEX13DA0A0J9YY54 714 aaPredicted RBP8.24□□□□□ -1.09
SPG11-216ENST00000559347 CD7P09564 240 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 C8orf88P0DMB2 117 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 AARDQ4LEZ3 155 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 TM4SF20Q53R12 229 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 Q56UQ5 140 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 FAM219AQ8IW50 185 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 UXS1Q8NBZ7 420 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 RBPMSQ93062 196 aaKnown RBP8.24□□□□□ -1.09
SPG11-216ENST00000559347 MARC2Q969Z3 335 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 RRNAD1Q96FB5 475 aaKnown RBP8.24□□□□□ -1.09
SPG11-216ENST00000559347 MISP3Q96FF7 219 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 RCHY1Q96PM5 261 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 NEURL2Q9BR09 285 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 TM2D3Q9BRN9 247 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 PDCD10Q9BUL8 212 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 DAZ1Q9NQZ3 744 aaKnown RBP8.24□□□□□ -1.09
SPG11-216ENST00000559347 MCUBQ9NWR8 336 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 SCP2D1Q9UJQ7 156 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 UFC1Q9Y3C8 167 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 SELENOKQ9Y6D0 94 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
SPG11-216ENST00000559347 NDUFA4O00483 81 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 MT-CO2P00403 227 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 IFNA17P01571 189 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 CTSGP08311 255 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 FCGR2BP31994 310 aaPredicted RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 HOXA1P49639 335 aaPredicted RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 ERHP84090 104 aaKnown RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 DHODHQ02127 395 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 KLF9Q13886 244 aaPredicted RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 GUCA2BQ16661 112 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 ZNF57Q68EA5 555 aaPredicted RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 Q6ZRM9 215 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 CCDC190Q86UF4 302 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 GALNT14Q96FL9 552 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
SPG11-216ENST00000559347 MRPL27Q9P0M9 148 aaKnown RBP8.23□□□□□ -1.09
SPG11-216ENST00000559347 RNASE2P10153 161 aaKnown RBP8.22□□□□□ -1.09
SPG11-216ENST00000559347 S100A5P33763 92 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 FAUP35544 74 aaKnown RBP8.22□□□□□ -1.09
SPG11-216ENST00000559347 TMEM187Q14656 261 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 PYDC2Q56P42 97 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 TMEM268Q5VZI3 342 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 PVRIGQ6DKI7 326 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 SELENOHQ8IZQ5 122 aaKnown RBP8.22□□□□□ -1.09
SPG11-216ENST00000559347 IL22RA2Q969J5 263 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 PINX1Q96BK5 328 aaKnown RBP8.22□□□□□ -1.09
SPG11-216ENST00000559347 GAR1Q9NY12 217 aaKnown RBP8.22□□□□□ -1.09
SPG11-216ENST00000559347 TMEM56-RWDD3S4R434 201 aa8.22□□□□□ -1.09
SPG11-216ENST00000559347 STARD9Q9P2P6 4700 aa8.21□□□□□ -1.09
SPG11-216ENST00000559347 IGHV3OR16-8A0A075B7F1 116 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 C15orf62A8K5M9 175 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
SPG11-216ENST00000559347 IGHV3-48P01763 117 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 SNCAP37840 140 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 ETV6P41212 452 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 MFAP4P55083 255 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 AP3S2P59780 193 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 SUPT4H1P63272 117 aaKnown RBP8.21□□□□□ -1.1
SPG11-216ENST00000559347 RELQ04864 619 aaPredicted RBP8.21□□□□□ -1.1
SPG11-216ENST00000559347 HAGHQ16775 308 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 LINC00322Q6ZN03 302 aaPredicted RBP8.21□□□□□ -1.1
SPG11-216ENST00000559347 TOMM5Q8N4H5 51 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 DEFB125Q8N687 156 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 GPR146Q96CH1 333 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 TXN2Q99757 166 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 C20orf24Q9BUV8 137 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 TUBA4BQ9H853 241 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 PRR13Q9NZ81 148 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 CACNG5Q9UF02 275 aa8.21□□□□□ -1.1
SPG11-216ENST00000559347 LYSTQ99698 3801 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 TRAV25A0A0B4J276 109 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 OR11H12B2RN74 326 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 K7EMT4 169 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 CORTO00230 105 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 NUPL2O15504 423 aaKnown RBP8.2□□□□□ -1.1
SPG11-216ENST00000559347 ZNF207O43670 478 aaKnown RBP8.2□□□□□ -1.1
SPG11-216ENST00000559347 GNG7O60262 68 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 AKR1C4P17516 323 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 SPCS3P61009 180 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 SLC16A13Q7RTY0 426 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 OR52B4Q8NGK2 314 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 OR52E5Q8NH55 327 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 DEDD2Q8WXF8 326 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 OR10C1Q96KK4 312 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 SPATA25Q9BR10 227 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms