RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 IGKV3-7A0A075B6H7 116 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 IGHV3-49A0A0A0MS15 119 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 TEX50A0A1B0GTY4 177 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 LGALS9O00182 355 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 CYB5BO43169 146 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 RBFOX2O43251 390 aaKnown RBP eCLIP5.48□□□□□ -1.53
SPG11-213ENST00000558988 PGLYRP1O75594 196 aaPredicted RBP5.48□□□□□ -1.53
SPG11-213ENST00000558988 EIF4EP06730 217 aaKnown RBP5.48□□□□□ -1.53
SPG11-213ENST00000558988 CRYGCP07315 174 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 PRSS3P35030 304 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 NCS1P62166 190 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 C16orf54Q6UWD8 224 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 LAX1Q8IWV1 398 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 CMTM1Q8IZ96 169 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 GDPD1Q8N9F7 314 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 OR1L6Q8NGR2 347 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 OR1L8Q8NGR8 309 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 ZNF502Q8TBZ5 544 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 MOB3AQ96BX8 217 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 FXYD6Q9H0Q3 95 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 PLEKHA2Q9HB19 425 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 COMMD9Q9P000 198 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 THYN1Q9P016 225 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 TENM2Q9NT68 2774 aa5.48□□□□□ -1.53
SPG11-213ENST00000558988 A0A087WXM4 84 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 SMIM31A0A1B0GVY4 71 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 FAM25AB3EWG3 89 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 FAM25CB3EWG5 89 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 FAM25GB3EWG6 89 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 M0QYG6 137 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 GPR31O00270 319 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 TGOLN2O43493 480 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 JTBO76095 146 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 YIF1AO95070 293 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 IGHV3-48P01763 117 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 SERPINE2P07093 398 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 F2RP25116 425 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 TFPI2P48307 235 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 TAS2R46P59540 309 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 VBP1P61758 197 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 WT1-ASQ06250 92 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 MSMO1Q15800 293 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 SPINK9Q5DT21 86 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 CROCCP3Q8IVE0 287 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 OR6F1Q8NGZ6 308 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 CD300LFQ8TDQ1 290 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 BORCS5Q969J3 196 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 LSM10Q969L4 123 aaKnown RBP5.47□□□□□ -1.53
SPG11-213ENST00000558988 PINX1Q96BK5 328 aaKnown RBP5.47□□□□□ -1.53
SPG11-213ENST00000558988 DGCR14Q96DF8 476 aaKnown RBP5.47□□□□□ -1.53
SPG11-213ENST00000558988 YIPF6Q96EC8 236 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 GGTLC1Q9BX51 225 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 C21orf62Q9NYP8 219 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 UFC1Q9Y3C8 167 aa5.47□□□□□ -1.53
SPG11-213ENST00000558988 IGHV3OR16-13A0A075B7E8 117 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 LOC102724200A0A096LPH7 203 aaPredicted RBP5.46□□□□□ -1.54
SPG11-213ENST00000558988 IGHV3-74A0A0B4J1X5 117 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 CXorf65A6NEN9 183 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 A8MWP6 167 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 HPGDSO60760 199 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 TNFAIP8O95379 198 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 PGAM2P15259 253 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 RPL35AP18077 110 aaKnown RBP5.46□□□□□ -1.54
SPG11-213ENST00000558988 GCSHP23434 173 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 PTBP1P26599 531 aaKnown RBP eCLIP5.46□□□□□ -1.543e-11■■■□□ 17
SPG11-213ENST00000558988 S100GP29377 79 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 MFAP2P55001 183 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 POU2AF1Q16633 256 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 IZUMO4Q1ZYL8 232 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 DEFB135Q30KP9 77 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 ANKRD55Q3KP44 614 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 LINC00322Q6ZN03 302 aaPredicted RBP5.46□□□□□ -1.54
SPG11-213ENST00000558988 H2BFWTQ7Z2G1 175 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 TBC1D26Q86UD7 250 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 SLC38A6Q8IZM9 456 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 OR5B3Q8NH48 314 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 TMEM190Q8WZ59 177 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 MRGPRFQ96AM1 343 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 CHRDL1Q9BU40 450 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 FUNDC2Q9BWH2 189 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 PRNDQ9UKY0 176 aa5.46□□□□□ -1.54
SPG11-213ENST00000558988 F11RQ9Y624 299 aaKnown RBP5.46□□□□□ -1.54
SPG11-213ENST00000558988 PPP5CP53041 499 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 THOC7Q6I9Y2 204 aaKnown RBP5.45□□□□□ -1.54
SPG11-213ENST00000558988 DHRS11Q6UWP2 260 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 GBGT1Q8N5D6 347 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 OR4A16Q8NH70 328 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 VN1R17PQ8TDU5 208 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 MARC2Q969Z3 335 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 SLC25A46Q96AG3 418 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 BSCL2Q96G97 398 aaPredicted RBP5.45□□□□□ -1.54
SPG11-213ENST00000558988 TMEM56Q96MV1 263 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 SRSF8Q9BRL6 282 aaKnown RBP5.45□□□□□ -1.54
SPG11-213ENST00000558988 DAZ1Q9NQZ3 744 aaKnown RBP5.45□□□□□ -1.54
SPG11-213ENST00000558988 NDUFA4L2Q9NRX3 87 aa5.45□□□□□ -1.54
SPG11-213ENST00000558988 MRPL27Q9P0M9 148 aaKnown RBP5.45□□□□□ -1.54
SPG11-213ENST00000558988 DNAH3Q8TD57 4116 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 A0A0J9YWU9 116 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 C15orf61A6NNL5 157 aa5.44□□□□□ -1.54
SPG11-213ENST00000558988 K7EIM0 57 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms