RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 POLR2GP62487 172 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAF3-206ENST00000558880 GNB1P62873 340 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 DEFA5Q01523 94 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 CD300CQ08708 224 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 IAH1Q2TAA2 248 aaPredicted RBP5.62□□□□□ -1.51
TRAF3-206ENST00000558880 AKIRIN2Q53H80 203 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 C9orf152Q5JTZ5 239 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 C18orf65Q6ZTR6 163 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 ZNF329Q86UD4 541 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 OR2C3Q8N628 320 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 UXS1Q8NBZ7 420 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 OR1L8Q8NGR8 309 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 GRPEL2Q8TAA5 225 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 RRNAD1Q96FB5 475 aaKnown RBP5.62□□□□□ -1.51
TRAF3-206ENST00000558880 ST6GAL2Q96JF0 529 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 C2orf50Q96LR7 162 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 FYTTD1Q96QD9 318 aaKnown RBP5.62□□□□□ -1.51
TRAF3-206ENST00000558880 P2RX4Q99571 388 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 AIFM2Q9BRQ8 373 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 RBKSQ9H477 322 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 GPN1Q9HCN4 374 aaPredicted RBP5.62□□□□□ -1.51
TRAF3-206ENST00000558880 PARP11Q9NR21 331 aa5.62□□□□□ -1.51
TRAF3-206ENST00000558880 IGLV11-55A0A075B6I3 123 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 TRAV41A0A0B4J266 112 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 C13orf42A0A1B0GVH6 325 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 A0A1W2PRX2 142 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 C15orf62A8K5M9 175 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 NPIPB5A8MRT5 1133 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 FAM90A26D6RGX4 464 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 K7EPK0 472 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 AP4M1O00189 453 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 CCNKO75909 580 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 ATG12O94817 140 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 REG1AP05451 166 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 TRAPPC2P0DI81 140 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 TRAPPC2BP0DI82 140 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 LYL1P12980 280 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 PSMB6P28072 239 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 SPCS3P61009 180 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 ARL16Q0P5N6 197 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 RAB32Q13637 225 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 PLGLAQ15195 96 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 ECSCRQ19T08 205 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 TET2Q6N021 2002 aaPredicted RBP5.61□□□□□ -1.51
TRAF3-206ENST00000558880 Q6ZSN1 163 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 HAPLN4Q86UW8 402 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 KLHDC1Q8N7A1 406 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 ZNF114Q8NC26 417 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 OR5T1Q8NG75 326 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 OR4A16Q8NH70 328 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 FAM110DQ8TAY7 271 aaPredicted RBP5.61□□□□□ -1.51
TRAF3-206ENST00000558880 OR4C12Q96R67 309 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 SRSF8Q9BRL6 282 aaKnown RBP5.61□□□□□ -1.51
TRAF3-206ENST00000558880 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 MAGT1Q9H0U3 335 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 FNDC4Q9H6D8 234 aaPredicted RBP5.61□□□□□ -1.51
TRAF3-206ENST00000558880 OR5AC2Q9NZP5 309 aa5.61□□□□□ -1.51
TRAF3-206ENST00000558880 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
TRAF3-206ENST00000558880 I3L2K1 104 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 K7EIM0 57 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 SSNA1O43805 119 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 SNAPC5O75971 98 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 NDUFB8O95169 186 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 OR13C7P0DN81 318 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 CD28P10747 220 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 NKX2-1P43699 371 aaPredicted RBP5.6□□□□□ -1.51
TRAF3-206ENST00000558880 UNQ5815/PRO19632Q6UWF5 114 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 OR11H4Q8NGC9 324 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 PPP1R1CQ8WVI7 109 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 BSCL2Q96G97 398 aaPredicted RBP5.6□□□□□ -1.51
TRAF3-206ENST00000558880 SPIN2AQ99865 258 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 SPIN2BQ9BPZ2 258 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 NEURL2Q9BR09 285 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 ZNF747Q9BV97 191 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 KRTAP4-2Q9BYR5 136 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 NMES1Q9C002 83 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 ZNF436Q9C0F3 470 aaPredicted RBP5.6□□□□□ -1.51
TRAF3-206ENST00000558880 COMMD5Q9GZQ3 224 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 FKBP11Q9NYL4 201 aa5.6□□□□□ -1.51
TRAF3-206ENST00000558880 F11RQ9Y624 299 aaKnown RBP5.6□□□□□ -1.51
TRAF3-206ENST00000558880 A0A1W2PN81 502 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 C5orf51A6NDU8 294 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 FAM25EA8MYX2 175 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 SMLR1H3BR10 107 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 SYNGR2O43760 224 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 CNIH1O95406 144 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 MPC2O95563 127 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 IFNA21P01568 189 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 IFNA17P01571 189 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 GIPP09681 153 aaPredicted RBP5.59□□□□□ -1.51
TRAF3-206ENST00000558880 IAPPP10997 89 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 CHRNA7P36544 502 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 BCAP31P51572 246 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 THOC7Q6I9Y2 204 aaKnown RBP5.59□□□□□ -1.51
TRAF3-206ENST00000558880 TMEM14EPQ6UXP3 125 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 GSG1LQ6UXU4 331 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 OR4F5Q8NH21 305 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 OR1S1Q8NH92 325 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 OR2T6Q8NHC8 308 aa5.59□□□□□ -1.51
TRAF3-206ENST00000558880 DTD1Q8TEA8 209 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms