RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 IL5P05113 134 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 RNASE2P10153 161 aaKnown RBP11.9□□□□□ -0.5
LINC01220-201ENST00000558575 SLURP1P55000 103 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 DEFA1P59665 94 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 DEFA3P59666 94 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 ERHP84090 104 aaKnown RBP11.9□□□□□ -0.5
LINC01220-201ENST00000558575 TNFRSF9Q07011 255 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 EXOSC2Q13868 293 aaKnown RBP11.9□□□□□ -0.5
LINC01220-201ENST00000558575 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 ZNF431Q8TF32 576 aaPredicted RBP11.9□□□□□ -0.5
LINC01220-201ENST00000558575 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 CCDC140Q96MF4 163 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 MARVELD1Q9BSK0 173 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 PDCD10Q9BUL8 212 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
LINC01220-201ENST00000558575 LYSTQ99698 3801 aa11.9□□□□□ -0.5
LINC01220-201ENST00000558575 IGHV3-21A0A0B4J1V1 117 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 PIGBOS1A0A0B4J2F0 54 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 LINC01619G3V211 115 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 K7EIM0 57 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 OR1S1Q8NH92 325 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 DCUN1D4Q92564 292 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 DPF1Q92782 380 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 DLX4Q92988 240 aaPredicted RBP11.89□□□□□ -0.51
LINC01220-201ENST00000558575 OR10C1Q96KK4 312 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 RBKSQ9H477 322 aa11.89□□□□□ -0.51
LINC01220-201ENST00000558575 RANGRFQ9HD47 186 aaPredicted RBP11.89□□□□□ -0.51
LINC01220-201ENST00000558575 C3orf84H3BNL1 204 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 I3L2K1 104 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 BMPR1BO00238 502 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 HOXA1P49639 335 aaPredicted RBP11.88□□□□□ -0.51
LINC01220-201ENST00000558575 C12orf45Q8N5I9 185 aaPredicted RBP11.88□□□□□ -0.51
LINC01220-201ENST00000558575 OR1L6Q8NGR2 347 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 SCARB1Q8WTV0 552 aa11.88□□□□□ -0.51
LINC01220-201ENST00000558575 CEBPZOSA8MTT3 80 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 PPP5D1E7EU14 171 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
LINC01220-201ENST00000558575 OR8U8P0C7N1 319 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 CD33P20138 364 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
LINC01220-201ENST00000558575 ID3Q02535 119 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 MLANAQ16655 118 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 PLET1Q6UQ28 207 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 CLEC19AQ6UXS0 136 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 VN1R17PQ8TDU5 208 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
LINC01220-201ENST00000558575 DNAH7Q8WXX0 4024 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
LINC01220-201ENST00000558575 CCSO14618 274 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 CLEC3BP05452 202 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 SNCAP37840 140 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 KLF5Q13887 457 aaPredicted RBP11.86□□□□□ -0.51
LINC01220-201ENST00000558575 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 EEF1AKMT3Q96AZ1 226 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 MISP3Q96FF7 219 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 CXorf58Q96LI9 332 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 MAGT1Q9H0U3 335 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 ENY2Q9NPA8 101 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 THYN1Q9P016 225 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 CACFD1Q9UGQ2 172 aa11.86□□□□□ -0.51
LINC01220-201ENST00000558575 TRBV7-1A0A0A6YYK4 115 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 FAM90A26D6RGX4 464 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 MT-CO2P00403 227 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 IFNA21P01568 189 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 IGHV3-48P01763 117 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 UXS1Q8NBZ7 420 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 DTD1Q8TEA8 209 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 ZNF414Q96IQ9 312 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
LINC01220-201ENST00000558575 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 MRPL36Q9P0J6 103 aaKnown RBP11.85□□□□□ -0.51
LINC01220-201ENST00000558575 U3KQK5 164 aa11.85□□□□□ -0.51
LINC01220-201ENST00000558575 SNRPGP15A8MWD9 76 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 CYB5BO43169 146 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 OR2C1O95371 312 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 ZP3P21754 424 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 HTR2BP41595 481 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 IAH1Q2TAA2 248 aaPredicted RBP11.84□□□□□ -0.51
LINC01220-201ENST00000558575 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 ZBTB8BQ8NAP8 495 aaPredicted RBP11.84□□□□□ -0.51
LINC01220-201ENST00000558575 RCC1LQ96I51 464 aaKnown RBP11.84□□□□□ -0.51
LINC01220-201ENST00000558575 ZC4H2Q9NQZ6 224 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
LINC01220-201ENST00000558575 CSMD3Q7Z407 3707 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 OVOL1O14753 267 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 SYNGR2O43760 224 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 PRAF2O60831 178 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 PTTG1O95997 202 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 IAPPP10997 89 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 GPR183P32249 361 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 ADMP35318 185 aa11.83□□□□□ -0.52
LINC01220-201ENST00000558575 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01220-201ENST00000558575 POLR2GP62487 172 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01220-201ENST00000558575 IL15RAQ13261 267 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms