RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ACOT12Q8WYK0 555 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 ARPC1AQ92747 370 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 MOB3AQ96BX8 217 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 ISOC1Q96CN7 298 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 UBE2E2Q96LR5 201 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 TSNAXQ99598 290 aaKnown RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 RNF5Q99942 180 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 RTBDNQ9BSG5 229 aaPredicted RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 MTFP1Q9UDX5 166 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 FOXA2Q9Y261 457 aaPredicted RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 VSIG4Q9Y279 399 aa3.21□□□□□ -1.9
SPG11-211ENST00000558561 HUWE1Q7Z6Z7 4374 aaKnown RBP3.21□□□□□ -1.9
SPG11-211ENST00000558561 IGHV3OR16-8A0A075B7F1 116 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 A0A0A6YYH2 397 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 A6NJ64 397 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 SEC14L6B5MCN3 397 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 RGS5O15539 181 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 RBBP9O75884 186 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 KBTBD11O94819 623 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 OR2A4O95047 310 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 IGKV1-5P01602 117 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 HSPB1P04792 205 aaKnown RBP3.2□□□□□ -1.9
SPG11-211ENST00000558561 RLN1P04808 185 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 SPNP16150 400 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 WT1-ASQ06250 92 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 EGFEM1PQ0D2K5 195 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 LHFPL1Q86WI0 220 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 CROCCP3Q8IVE0 287 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 TTC9CQ8N5M4 171 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 SLC24A4Q8NFF2 622 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 OR13C8Q8NGS7 320 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 OR6F1Q8NGZ6 308 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 LHFPL5Q8TAF8 219 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 MARCH1Q8TCQ1 289 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 C4orf3Q8WVX3 66 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 DIRAS2Q96HU8 199 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 OR2A7Q96R45 310 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 TP53RKQ96S44 253 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 SDHCQ99643 169 aaPredicted RBP3.2□□□□□ -1.9
SPG11-211ENST00000558561 NXF2Q9GZY0 626 aaKnown RBP3.2□□□□□ -1.9
SPG11-211ENST00000558561 VCX3AQ9NNX9 186 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 IFT46Q9NQC8 304 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 COA4Q9NYJ1 87 aa3.2□□□□□ -1.9
SPG11-211ENST00000558561 TRBV9A0A0B4J1U6 114 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 A0A0B4J293 547 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 LINC00854A0A1B0GVQ3 168 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 SMIM31A0A1B0GVY4 71 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 IGLC7A0M8Q6 106 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 MFSD2BA6NFX1 497 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 LINC01619G3V211 115 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 GPR31O00270 319 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 OVOL1O14753 267 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 DIRAS3O95661 229 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 HPRT1P00492 218 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CD74P04233 296 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CRYGCP07315 174 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CSN3P07498 182 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 LGALS1P09382 135 aaKnown RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 CTRB1P17538 263 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 F2RP25116 425 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 PSMB6P28072 239 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ETV6P41212 452 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CBX5P45973 191 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 RPL27AP46776 148 aaKnown RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 PPP5CP53041 499 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 TMBIM6P55061 237 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 SYNJ2BPP57105 145 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 OR2B8PP59922 312 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 TSPAN5P62079 268 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 RHOGP84095 191 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 RUNX1Q01196 453 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ZNF616Q08AN1 781 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 TMEM267Q0VDI3 215 aaPredicted RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 KLF5Q13887 457 aaPredicted RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 MEF2DQ14814 521 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ARL6IP1Q15041 203 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ZNF79Q15937 498 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 RTL8BQ17RB0 113 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 VMA21Q3ZAQ7 101 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CTRB2Q6GPI1 263 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ZNF343Q6P1L6 599 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CLEC19AQ6UXS0 136 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 FAM219AQ8IW50 185 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 MMD2Q8IY49 270 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 COMMD1Q8N668 190 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 TMEM229BQ8NBD8 167 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 OR4C16Q8NGL9 310 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 MCFD2Q8NI22 146 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 CACNG8Q8WXS5 425 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 TMEM230Q96A57 120 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 DGCR14Q96DF8 476 aaKnown RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 SEC22AQ96IW7 307 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 ADTRPQ96IZ2 230 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 PHB2Q99623 299 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 HSD17B10Q99714 261 aaKnown RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 HINT2Q9BX68 163 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 C6orf62Q9GZU0 229 aaPredicted RBP3.19□□□□□ -1.9
SPG11-211ENST00000558561 SLA2Q9H6Q3 261 aa3.19□□□□□ -1.9
SPG11-211ENST00000558561 HRASLSQ9HDD0 168 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms