RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 OR5A1Q8NGJ0 315 aa8.98□□□□□ -0.97
USP3-206ENST00000558157 AP1S3Q96PC3 154 aa8.98□□□□□ -0.97
USP3-206ENST00000558157 PRRG4Q9BZD6 226 aa8.98□□□□□ -0.97
USP3-206ENST00000558157 TRAV24A0A0B4J272 114 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 OR5AL1P0C617 328 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 SLAQ13239 276 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 IBA57Q5T440 356 aaKnown RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 CHCHD1Q96BP2 118 aaKnown RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 GGTLC1Q9BX51 225 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 OR2H1Q9GZK4 316 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 TECRQ9NZ01 308 aaKnown RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 SLC25A10Q9UBX3 287 aaPredicted RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 IGKV3D-15A0A087WSY6 115 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 LOC102724200A0A096LPH7 203 aaPredicted RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 H3BRM9 83 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 SYS1-DBNDD2H3BUS1 97 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 GPR183P32249 361 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 G6PCP35575 357 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 PRSS12P56730 875 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 COLCA1Q6ZS62 124 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 AAED1Q7RTV5 226 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 Q8NA96 180 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 OR2V2Q96R30 315 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 CHRDL1Q9BU40 450 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 PSG11Q9UQ72 335 aa8.97□□□□□ -0.97
USP3-206ENST00000558157 PRRC2CQ9Y520 2896 aaKnown RBP8.97□□□□□ -0.97
USP3-206ENST00000558157 C9orf118A6NHY6 69 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 K7EP34 96 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 SPINK4O60575 86 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 RTL8BQ17RB0 113 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 H2BFWTQ7Z2G1 175 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 ATP5L2Q7Z4Y8 100 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 TUSC5Q8IXB3 177 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 HS3ST6Q96QI5 342 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 IL36RNQ9UBH0 155 aa8.96□□□□□ -0.97
USP3-206ENST00000558157 A6NDN8 102 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 FAM90A9PA6NNJ1 464 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 GPM6AP51674 278 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 RNASEKQ6P5S7 137 aaKnown RBP8.96□□□□□ -0.98
USP3-206ENST00000558157 PQLC2Q6ZP29 291 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 ZNF837Q96EG3 531 aaPredicted RBP8.96□□□□□ -0.98
USP3-206ENST00000558157 MGST2Q99735 147 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 RNASE7Q9H1E1 156 aaKnown RBP8.96□□□□□ -0.98
USP3-206ENST00000558157 CLCF1Q9UBD9 225 aa8.96□□□□□ -0.98
USP3-206ENST00000558157 HBZP02008 142 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 EIF4EBP1Q13541 118 aaPredicted RBP8.95□□□□□ -0.98
USP3-206ENST00000558157 EFNB3Q15768 340 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 C9orf135Q5VTT2 229 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 FAM231DQ6ZW35 169 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 CLUHP3Q96NS8 147 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 TRIB1Q96RU8 372 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 MBNL3Q9NUK0 354 aaKnown RBP8.95□□□□□ -0.98
USP3-206ENST00000558157 PIEZO2Q9H5I5 2752 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 ZZEF1O43149 2961 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 HAND1O96004 215 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 PPIAL4GP0DN37 164 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 GATA2P23769 480 aaPredicted RBP8.95□□□□□ -0.98
USP3-206ENST00000558157 PPOXP50336 477 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 RAB31Q13636 194 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 FAM120AOSQ5T036 256 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 ZNF497Q6ZNH5 498 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 DOLPP1Q86YN1 238 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 OR1N2Q8NGR9 330 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 OR2T6Q8NHC8 308 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 ST6GALNAC6Q969X2 333 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 ZNF835Q9Y2P0 537 aa8.95□□□□□ -0.98
USP3-206ENST00000558157 LSM4Q9Y4Z0 139 aaKnown RBP8.95□□□□□ -0.98
USP3-206ENST00000558157 MRPL33O75394 65 aaKnown RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 TCL1AP56279 114 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 SLC35B1P78383 322 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 NRN1LQ496H8 165 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 WFDC8Q8IUA0 241 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 DPF1Q92782 380 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 GRAMD2BQ96HH9 432 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 FGF23Q9GZV9 251 aaPredicted RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 NPVFQ9HCQ7 196 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 ARHGAP21Q5T5U3 1957 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 RBMXL2O75526 392 aaKnown RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 IGHV3-9P01782 118 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 COX8AP10176 69 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 FXYD3Q14802 87 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 PRR30Q53SZ7 412 aaPredicted RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 TMEM97Q5BJF2 176 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 MIC13Q5XKP0 118 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 SLC35E4Q6ICL7 350 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 BPIFA4PQ86YQ2 179 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 OR52E5Q8NH55 327 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 ATP6V0BQ99437 205 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 SIGMAR1Q99720 223 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 FOXB1Q99853 325 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 SSBP4Q9BWG4 385 aaPredicted RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 PKIBQ9C010 78 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 PRORYQ9H606 182 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 CRIM1Q9NZV1 1036 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 JKAMPQ9P055 326 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms