RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SHPKQ9UHJ6 478 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 PAIP2BQ9ULR5 123 aaKnown RBP6.89□□□□□ -1.31
SPG11-207ENST00000558138 ZNF256Q9Y2P7 627 aaPredicted RBP6.89□□□□□ -1.31
SPG11-207ENST00000558138 TMEM56-RWDD3S4R434 201 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 NOTCH3Q9UM47 2321 aa6.89□□□□□ -1.31
SPG11-207ENST00000558138 DUXBA0A1W2PPF3 345 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 CORTO00230 105 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
SPG11-207ENST00000558138 TGOLN2O43493 480 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 GNG7O60262 68 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 MT-CO2P00403 227 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 IGHV3-48P01763 117 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 HOXB5P09067 269 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 MFAP4P55083 255 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 SUPT4H1P63272 117 aaKnown RBP6.88□□□□□ -1.31
SPG11-207ENST00000558138 EGFEM1PQ0D2K5 195 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 DUSP18Q8NEJ0 188 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 ZNF502Q8TBZ5 544 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 SCARB1Q8WTV0 552 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 SDHCQ99643 169 aaPredicted RBP6.88□□□□□ -1.31
SPG11-207ENST00000558138 C20orf24Q9BUV8 137 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 PALMDQ9NP74 551 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 FLVCR2Q9UPI3 526 aa6.88□□□□□ -1.31
SPG11-207ENST00000558138 TRAV6A0A075B6T7 132 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 FAM240BA0A1B0GVZ2 78 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 RPS10-NUDT3A0A1W2PQS6 291 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 WI2-2373I1.2A0A1W2PRP0 233 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 WRBO00258 174 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 YIF1AO95070 293 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 IFNA10P01566 189 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 IFNA21P01568 189 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 OR4E1P0C645 316 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 P0C879 139 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 SPNP16150 400 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 ANXA7P20073 488 aaKnown RBP6.87□□□□□ -1.31
SPG11-207ENST00000558138 HTR2BP41595 481 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 MFAP2P55001 183 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 UBE2MP61081 183 aaKnown RBP6.87□□□□□ -1.31
SPG11-207ENST00000558138 RELQ04864 619 aaPredicted RBP6.87□□□□□ -1.31
SPG11-207ENST00000558138 LCN12Q6JVE5 192 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 Q6ZRM9 215 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 LINC00299Q6ZSB3 139 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 NOXA1Q86UR1 476 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 ZNF114Q8NC26 417 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 SLC24A4Q8NFF2 622 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 OR52E5Q8NH55 327 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 ENKURQ8TC29 256 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 BSCL2Q96G97 398 aaPredicted RBP6.87□□□□□ -1.31
SPG11-207ENST00000558138 C20orf85Q9H1P6 137 aa6.87□□□□□ -1.31
SPG11-207ENST00000558138 A0A1B0GU03 582 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 C9orf170A2RU37 121 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 K7EIL1 84 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 K7EIM0 57 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 MED6O75586 246 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 SCGB1D2O95969 90 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 GP9P14770 177 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 NPY1RP25929 384 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 NPBWR1P48145 328 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 GUCA2BQ16661 112 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 ANKRD55Q3KP44 614 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 LYG2Q86SG7 212 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 GTSCR1Q86UQ5 136 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 GPHB5Q86YW7 130 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 UXS1Q8NBZ7 420 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 DTD1Q8TEA8 209 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 RBKSQ9H477 322 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 UFC1Q9Y3C8 167 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 TMED3Q9Y3Q3 217 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
SPG11-207ENST00000558138 NOTCH1P46531 2555 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 C2orf70A6NJV1 201 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 FAM25EA8MYX2 175 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 LGALS9O00182 355 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 TCRBP04435 133 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 IFNA4P05014 189 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 CSN3P07498 182 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 RNASE2P10153 161 aaKnown RBP6.85□□□□□ -1.31
SPG11-207ENST00000558138 IAPPP10997 89 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 FOLR2P14207 255 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 BTCP35070 178 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 DEFA1P59665 94 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 DEFA3P59666 94 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 RPP30P78346 268 aaKnown RBP6.85□□□□□ -1.31
SPG11-207ENST00000558138 TNFRSF9Q07011 255 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 CD69Q07108 199 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 DHRS2Q13268 280 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 KLK9Q2XQG4 91 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 NMSQ5H8A3 153 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 GGNBP1Q5YKI7 109 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 CACNG8Q8WXS5 425 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 TXN2Q99757 166 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 NUDT15Q9NV35 164 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 KLK9Q9UKQ9 250 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 SELENOKQ9Y6D0 94 aa6.85□□□□□ -1.31
SPG11-207ENST00000558138 IGHV3OR16-8A0A075B7F1 116 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 INS-IGF2F8WCM5 200 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 I3L2K1 104 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 NDUFA4O00483 81 aa6.84□□□□□ -1.31
SPG11-207ENST00000558138 PLA2G10O15496 165 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms