RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IGHV3-15A0A0B4J1V0 119 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 A0A0J9YW62 118 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 M0QZK8 103 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 PSCAO43653 123 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 SYNGR2O43760 224 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 GADD45GO95257 159 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 IGHV3-7P01780 117 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 PPBPP02775 128 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 UCHL1P09936 223 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 DNAH10OSP0CZ25 163 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 COL8A2P25067 703 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
TDP1-217ENST00000557782 EBI3Q14213 229 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 ZNF141Q15928 474 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 LTC4SQ16873 150 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 AMMECR1LQ6DCA0 310 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 TMEM136Q6ZRR5 245 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 KTN1-AS1Q86SY8 53 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 LYPD6Q86Y78 171 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 TMEM86AQ8N2M4 240 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 C10orf126Q8N4M7 172 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 OR5C1Q8NGR4 320 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 DNAJC9Q8WXX5 260 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 CYYR1Q96J86 154 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 CAPZA3Q96KX2 299 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 KRTAP9-8Q9BYQ0 159 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 CKLFQ9UBR5 152 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 OR52A1Q9UKL2 312 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 PCTPQ9UKL6 214 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 ERGIC3Q9Y282 383 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 ASB4Q9Y574 426 aa2.26□□□□□ -2.05
TDP1-217ENST00000557782 BAZ1AQ9NRL2 1556 aaPredicted RBP2.26□□□□□ -2.05
TDP1-217ENST00000557782 DOCK4Q8N1I0 1966 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 K7EM74 188 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 MSMBP08118 114 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 ZNF22P17026 224 aaPredicted RBP2.25□□□□□ -2.05
TDP1-217ENST00000557782 SRIP30626 198 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 SRP14P37108 136 aaKnown RBP2.25□□□□□ -2.05
TDP1-217ENST00000557782 CDC42P60953 191 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 EIF5AP63241 154 aaKnown RBP2.25□□□□□ -2.05
TDP1-217ENST00000557782 KRTAP25-1Q3LHN0 102 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 DNLZQ5SXM8 178 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 ANGPTL5Q86XS5 388 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 ST6GALNAC3Q8NDV1 305 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 FGF13Q92913 245 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 TCEAL4Q96EI5 215 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 HIGD2AQ9BW72 106 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 RTL8AQ9BWD3 113 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 TMEM138Q9NPI0 162 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 GSKIPQ9P0R6 139 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 LAMTOR2Q9Y2Q5 125 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 SLIT3O75094 1523 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 HEATR5AQ86XA9 2040 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 CEP152O94986 1710 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 WIZO95785 1651 aa2.25□□□□□ -2.05
TDP1-217ENST00000557782 CPDO75976 1380 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 CCDC88AQ3V6T2 1871 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 A0A087X0T9 212 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 MDFIC2A0A1B0GVS7 189 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 C1orf196B1AJZ1 125 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 C19orf84I3L1E1 186 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 TAX1BP3O14907 124 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 SLC22A1O15245 554 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 CCL5P13501 91 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 NFYBP25208 207 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 PSMB8P28062 276 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 BCL2L15Q5TBC7 163 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 MIR17HGQ75NE6 70 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 HMGN2P46Q86SG4 172 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 BPIFA4PQ86YQ2 179 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 OR8D4Q8NGM9 314 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 THEM6Q8WUY1 208 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 ISOC1Q96CN7 298 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 SLAMF6Q96DU3 332 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 CCDC115Q96NT0 180 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 SCGB3A1Q96QR1 104 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 DOHHQ9BU89 302 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 OR8D2Q9GZM6 311 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 OSTCQ9NRP0 149 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 NAT8Q9UHE5 227 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 JPT1Q9UK76 154 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 FAM215AQ9Y5M1 114 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 NUBP2Q9Y5Y2 271 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 GREB1Q4ZG55 1949 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 DENND4CQ5VZ89 1909 aa2.24□□□□□ -2.05
TDP1-217ENST00000557782 OBSL1O75147 1896 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 ZNF860A6NHJ4 632 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 DEGS1O15121 323 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 GGCTO75223 188 aaKnown RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 NFYAP23511 347 aaPredicted RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 CCR2P41597 374 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 SRP9P49458 86 aaKnown RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 RPS28P62857 69 aaKnown RBP2.23□□□□□ -2.05
TDP1-217ENST00000557782 CCDC58Q4VC31 144 aa2.23□□□□□ -2.05
TDP1-217ENST00000557782 FKBP1CQ5VVH2 108 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms