RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 LGI3Q8N145 548 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 SCARB1Q8WTV0 552 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 ATP6V0BQ99437 205 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 SDHCQ99643 169 aaPredicted RBP12.08□□□□□ -0.48
TUBB3-214ENST00000557490 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 CACNG5Q9UF02 275 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 CACFD1Q9UGQ2 172 aa12.08□□□□□ -0.48
TUBB3-214ENST00000557490 OR2T8A6NH00 312 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 INS-IGF2F8WCM5 200 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 K7EIM0 57 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 Q56UQ5 140 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 DYNLRB2Q8TF09 96 aa12.07□□□□□ -0.48
TUBB3-214ENST00000557490 BSCL2Q96G97 398 aaPredicted RBP12.07□□□□□ -0.48
TUBB3-214ENST00000557490 GAR1Q9NY12 217 aaKnown RBP12.07□□□□□ -0.48
TUBB3-214ENST00000557490 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 SULT1A3P0DMM9 295 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 SULT1A4P0DMN0 295 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 IL7P13232 177 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 VAMP1P23763 118 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 CCR6P51684 374 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 CENPSQ8N2Z9 138 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
TUBB3-214ENST00000557490 C7orf50Q9BRJ6 194 aaKnown RBP12.06□□□□□ -0.48
TUBB3-214ENST00000557490 PALMDQ9NP74 551 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
TUBB3-214ENST00000557490 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
TUBB3-214ENST00000557490 A6NHS1 94 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 C2orf70A6NJV1 201 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 CEBPZOSA8MTT3 80 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 I3L2K1 104 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 MT-CO2P00403 227 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 MFAP4P55083 255 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 LCN12Q6JVE5 192 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 LYZL2Q7Z4W2 148 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 OR2K2Q8NGT1 345 aa12.05□□□□□ -0.48
TUBB3-214ENST00000557490 IGHV3-35A0A0C4DH35 117 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 DUXBA0A1W2PPF3 345 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 CORTO00230 105 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 NDUFB6O95139 128 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 SFT2D2O95562 160 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 FOLR2P14207 255 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 CD69Q07108 199 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 SMCO1Q147U7 214 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 CNPY1Q3B7I2 92 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 LINC00299Q6ZSB3 139 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 TXN2Q99757 166 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 HEYLQ9NQ87 328 aaPredicted RBP12.04□□□□□ -0.48
TUBB3-214ENST00000557490 TECRQ9NZ01 308 aaKnown RBP12.04□□□□□ -0.48
TUBB3-214ENST00000557490 UFC1Q9Y3C8 167 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 SMAD5-AS1Q9Y6J3 95 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 SACSQ9NZJ4 4579 aa12.04□□□□□ -0.48
TUBB3-214ENST00000557490 A8MWP6 167 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 NUPL2O15504 423 aaKnown RBP12.03□□□□□ -0.48
TUBB3-214ENST00000557490 RNASE2P10153 161 aaKnown RBP12.03□□□□□ -0.48
TUBB3-214ENST00000557490 CBLN1P23435 193 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-214ENST00000557490 HTR2BP41595 481 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 UBE2MP61081 183 aaKnown RBP12.03□□□□□ -0.48
TUBB3-214ENST00000557490 PPP1R1AQ13522 171 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 NMSQ5H8A3 153 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 ADAMTSL5Q6ZMM2 481 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 B9D2Q9BPU9 175 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 CHRDL1Q9BU40 450 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 ZNF436Q9C0F3 470 aaPredicted RBP12.03□□□□□ -0.48
TUBB3-214ENST00000557490 STAB2Q8WWQ8 2551 aa12.03□□□□□ -0.48
TUBB3-214ENST00000557490 A0A1B0GU03 582 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 TMEM213A2RRL7 107 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 F8W735 103 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-214ENST00000557490 NDUFA4O00483 81 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 NXPH3O95157 252 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 IGHV3-48P01763 117 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 ELLP55199 621 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-214ENST00000557490 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-214ENST00000557490 DEFB114Q30KQ6 69 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 ANKRD55Q3KP44 614 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.49
TUBB3-214ENST00000557490 TM4SF20Q53R12 229 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 PVRIGQ6DKI7 326 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 UNQ9165/PRO28630Q6UXU0 137 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 DUSP18Q8NEJ0 188 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 OR1S1Q8NH92 325 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 S100ZQ8WXG8 99 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 MARC2Q969Z3 335 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 CCDC32Q9BV29 185 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 HIPK2Q9H2X6 1198 aa12.02□□□□□ -0.49
TUBB3-214ENST00000557490 GNG7O60262 68 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 CTSGP08311 255 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 EDN2P20800 178 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 ADMP35318 185 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 NPBWR1P48145 328 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 BSXQ3C1V8 233 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 LRTM2Q8N967 370 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 UXS1Q8NBZ7 420 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 CACNG8Q8WXS5 425 aa12.01□□□□□ -0.49
TUBB3-214ENST00000557490 IZUMO1RA6ND01 250 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms