RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 MRPL18Q9H0U6 180 aaKnown RBP14.38□□□□□ -0.11
XRCC3-218ENST00000557439 HELTA6NFD8 242 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 GCGP01275 180 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 C19orf35Q6ZS72 473 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 MMD2Q8IY49 270 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 FAM57AQ8TBR7 257 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 C11orf52Q96A22 123 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 RITA1Q96K30 269 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 NCOR1P1Q9H4R4 102 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 RAB9BQ9NP90 201 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 TPSG1Q9NRR2 321 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 V9GYV3 84 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 MT-CO2P00403 227 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 GNG4P50150 75 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 TEX36Q5VZQ5 186 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 ZNF600Q6ZNG1 722 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 DMRTC2Q8IXT2 367 aaPredicted RBP14.37□□□□□ -0.11
XRCC3-218ENST00000557439 LINC00312Q9Y6C7 94 aa14.37□□□□□ -0.11
XRCC3-218ENST00000557439 IGHV3-72A0A0B4J1Y9 119 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 H0YJW9 148 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 PLAUP00749 431 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 CA1P00915 261 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-218ENST00000557439 KIAA1644Q3SXP7 199 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 RUSC1-AS1Q66K80 236 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 ST6GALNAC3Q8NDV1 305 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 CORO2AQ92828 525 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 COMMD5Q9GZQ3 224 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 FKBP11Q9NYL4 201 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 MRPL36Q9P0J6 103 aaKnown RBP14.36□□□□□ -0.11
XRCC3-218ENST00000557439 ZNF257Q9Y2Q1 563 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 DCHS2Q6V1P9 2916 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 C17orf100A8MU93 164 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 THBDP07204 575 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 PYYP10082 97 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 YPEL3P61236 119 aaPredicted RBP14.36□□□□□ -0.11
XRCC3-218ENST00000557439 ZNF833PQ6ZTB9 187 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 LINC00574Q9H8X3 128 aa14.36□□□□□ -0.11
XRCC3-218ENST00000557439 CGB1A6NKQ9 187 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 SNURFLB1AK76 121 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 FCN1O00602 326 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 MGST1P10620 155 aaKnown RBP14.35□□□□□ -0.11
XRCC3-218ENST00000557439 AREGP15514 252 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 PAX1P15863 534 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 WT1-ASQ06250 92 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 CD69Q07108 199 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 C2orf83Q53S99 150 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 TMEM108Q6UXF1 575 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 ZNF714Q96N38 554 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 MS4A10Q96PG2 267 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 FNDC4Q9H6D8 234 aaPredicted RBP14.35□□□□□ -0.11
XRCC3-218ENST00000557439 TECRQ9NZ01 308 aaKnown RBP14.35□□□□□ -0.11
XRCC3-218ENST00000557439 MKRN2OSH3BPM6 223 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 SERF1AO75920 110 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 PRR31Q5SQ13 230 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 SAP30LQ9HAJ7 183 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 BET1LQ9NYM9 111 aa14.35□□□□□ -0.11
XRCC3-218ENST00000557439 NKX6-3A6NJ46 265 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 RPL8P62917 257 aaKnown RBP14.34□□□□□ -0.11
XRCC3-218ENST00000557439 USF2Q15853 346 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-218ENST00000557439 TDRG1Q3Y452 100 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 CMTM2Q8TAZ6 248 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 POLR3KQ9Y2Y1 108 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-218ENST00000557439 C9JCJ5 164 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 C16orf97H3BN30 126 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 RPEL1Q2QD12 228 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 C3orf36Q3SXR2 165 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 OR10X1Q8NGY0 326 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 NDUFA4L2Q9NRX3 87 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 CTSZQ9UBR2 303 aa14.34□□□□□ -0.11
XRCC3-218ENST00000557439 EREGO14944 169 aa14.33□□□□□ -0.11
XRCC3-218ENST00000557439 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.11
XRCC3-218ENST00000557439 APOA2P02652 100 aa14.33□□□□□ -0.11
XRCC3-218ENST00000557439 FLYWCH2Q96CP2 140 aaKnown RBP14.33□□□□□ -0.11
XRCC3-218ENST00000557439 SLC25A33Q9BSK2 321 aa14.33□□□□□ -0.11
XRCC3-218ENST00000557439 CBLN4Q9NTU7 201 aa14.33□□□□□ -0.11
XRCC3-218ENST00000557439 IGHV3-21A0A0B4J1V1 117 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 OR5G3P0C626 314 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 CRISP2P16562 243 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 TNFRSF1AP19438 455 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 PRR30Q53SZ7 412 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-218ENST00000557439 Q6ZWC4 215 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 OR5B3Q8NH48 314 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 NPIPB3Q92617 1050 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 SGK494Q96LW2 274 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 SSBP3Q9BWW4 388 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-218ENST00000557439 SLC25A2Q9BXI2 301 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
XRCC3-218ENST00000557439 TRAV34A0A0B4J273 112 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 ZNF705FA8MVS1 300 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 IGLV2-8P01709 118 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 ZNF705DP0CH99 300 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 ZNF705BP0CI00 300 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 CDKN1AP38936 164 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 RAB4BP61018 213 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 IQCJQ1A5X6 159 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 MRPL54Q6P161 138 aaKnown RBP14.32□□□□□ -0.12
XRCC3-218ENST00000557439 NUP37Q8NFH4 326 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 OR5AU1Q8NGC0 362 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 FAM168AQ92567 244 aa14.32□□□□□ -0.12
XRCC3-218ENST00000557439 ABHD17AQ96GS6 310 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms