RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 PLET1Q6UQ28 207 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 Q6ZRM9 215 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SCARB1Q8WTV0 552 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 MISP3Q96FF7 219 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 BSCL2Q96G97 398 aaPredicted RBP9.53□□□□□ -0.88
SLIRP-209ENST00000557342 C21orf62Q9NYP8 219 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 CACNG5Q9UF02 275 aa9.53□□□□□ -0.88
SLIRP-209ENST00000557342 SORL1Q92673 2214 aa9.52□□□□□ -0.88
SLIRP-209ENST00000557342 LINC00854A0A1B0GVQ3 168 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 K7EIM0 57 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 CORTO00230 105 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 TGOLN2O43493 480 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 NDUFB6O95139 128 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 IGLV1-51P01701 117 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 HLA-AP01891 365 aaKnown RBP9.52□□□□□ -0.89
SLIRP-209ENST00000557342 SPNP16150 400 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 VAMP1P23763 118 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 CCR6P51684 374 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 IL34Q6ZMJ4 242 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 PRR25Q96S07 402 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 PRR13Q9NZ81 148 aa9.52□□□□□ -0.89
SLIRP-209ENST00000557342 OR2T8A6NH00 312 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 PLA2G10O15496 165 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 SFT2D2O95562 160 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 PTTG1O95997 202 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 GP9P14770 177 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 MFAP4P55083 255 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 SMCO1Q147U7 214 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 RGS21Q2M5E4 152 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 Q56UQ5 140 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 LRTM2Q8N967 370 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 OR2K2Q8NGT1 345 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 TXN2Q99757 166 aa9.51□□□□□ -0.89
SLIRP-209ENST00000557342 IGHV3-21A0A0B4J1V1 117 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 A0A1B0GU03 582 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 ZNF320A2RRD8 509 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 C2orf70A6NJV1 201 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 CEBPZOSA8MTT3 80 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 A8MWP6 167 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 I3L2K1 104 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 LYRM1O43325 122 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 MT-CO2P00403 227 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
SLIRP-209ENST00000557342 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-209ENST00000557342 HTR2BP41595 481 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 PPP1R1AQ13522 171 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 LCN12Q6JVE5 192 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 UBAC2Q8NBM4 344 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 DYNLRB2Q8TF09 96 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 PINX1Q96BK5 328 aaKnown RBP9.5□□□□□ -0.89
SLIRP-209ENST00000557342 ZNF436Q9C0F3 470 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-209ENST00000557342 HIPK2Q9H2X6 1198 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 HEYLQ9NQ87 328 aaPredicted RBP9.5□□□□□ -0.89
SLIRP-209ENST00000557342 ZC4H2Q9NQZ6 224 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
SLIRP-209ENST00000557342 NUPL2O15504 423 aaKnown RBP9.49□□□□□ -0.89
SLIRP-209ENST00000557342 SLC25A6P12236 298 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 BTCP35070 178 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 ELLP55199 621 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-209ENST00000557342 RELQ04864 619 aaPredicted RBP9.49□□□□□ -0.89
SLIRP-209ENST00000557342 NOXA1Q86UR1 476 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 DUSP18Q8NEJ0 188 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 OR1S1Q8NH92 325 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 TECRQ9NZ01 308 aaKnown RBP9.49□□□□□ -0.89
SLIRP-209ENST00000557342 UFC1Q9Y3C8 167 aa9.49□□□□□ -0.89
SLIRP-209ENST00000557342 LSM4Q9Y4Z0 139 aaKnown RBP9.49□□□□□ -0.89
SLIRP-209ENST00000557342 C9orf170A2RU37 121 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 F8W735 103 aaPredicted RBP9.48□□□□□ -0.89
SLIRP-209ENST00000557342 NDUFA4O00483 81 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 GNG7O60262 68 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 FOLR2P14207 255 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 CBLN1P23435 193 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 NPBWR1P48145 328 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 TNFRSF9Q07011 255 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 OXA1LQ15070 435 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 BSXQ3C1V8 233 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 ANKRD55Q3KP44 614 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 COQ8AQ8NI60 647 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 MARC2Q969Z3 335 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 HSPB7Q9UBY9 170 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 SMAD5-AS1Q9Y6J3 95 aa9.48□□□□□ -0.89
SLIRP-209ENST00000557342 IGHV3-35A0A0C4DH35 117 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 RPS10-NUDT3A0A1W2PQS6 291 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 TMEM213A2RRL7 107 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 SCGB2A1O75556 95 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 CTSGP08311 255 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 OR4E1P0C645 316 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 OPRK1P41145 380 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 C2orf83Q53S99 150 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 UNQ9165/PRO28630Q6UXU0 137 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 RNASEH2CQ8TDP1 164 aaKnown RBP9.47□□□□□ -0.89
SLIRP-209ENST00000557342 TMEM190Q8WZ59 177 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 CHRDL1Q9BU40 450 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 MRPL27Q9P0M9 148 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms