RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 ACOT7LQ6ZUV0 252 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 SELENOHQ8IZQ5 122 aaKnown RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 LINC01561Q8N1V8 128 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 FGFRL1Q8N441 504 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 C11orf42Q8N5U0 333 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 OR4D5Q8NGN0 318 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 OR51H1Q8NH63 302 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 OR4S2Q8NH73 311 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 OR9G1Q8NH87 305 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 GRPEL2Q8TAA5 225 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 CCL19Q99731 98 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF251Q9BRH9 671 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 CHRDL1Q9BU40 450 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 CHIAQ9BZP6 476 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 PARP12Q9H0J9 701 aaKnown RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 PSG11Q9UQ72 335 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 PRELID3BQ9Y3B1 194 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 AMMECR1Q9Y4X0 333 aaPredicted RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 MMP24Q9Y5R2 645 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 KPTNQ9Y664 436 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 TACC2O95359 2948 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 YLPM1P49750 1951 aaKnown RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 A0A1W2PS18 150 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 FBLL1A6NHQ2 334 aaKnown RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 ENSAO43768 121 aaKnown RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 SIX6O95475 246 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 CLDN1O95832 211 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 IGLV1-47P01700 117 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 RLN2P04090 185 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 SAA2P0DJI9 122 aaPredicted RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 S100A11P31949 105 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 RAB13P51153 203 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 TAS2R30P59541 319 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 RPL23AP62750 156 aaKnown RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 GNB2P62879 340 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 SMCO1Q147U7 214 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 LGALSLQ3ZCW2 172 aaPredicted RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF585BQ52M93 769 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 CT45A1Q5HYN5 189 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF767PQ75MW2 155 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 C16orf82Q7Z2V1 217 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 LYZL2Q7Z4W2 148 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 KCNRGQ8N5I3 272 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 INO80EQ8NBZ0 244 aaPredicted RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 OR1L4Q8NGR5 311 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 CT45A3Q8NHU0 189 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 RFESDQ8TAC1 157 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 LHX4Q969G2 390 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 SEC22AQ96IW7 307 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 TMEM133Q9H2Q1 129 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 C11orf1Q9H5F2 150 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 CHTOPQ9Y3Y2 248 aaKnown RBP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 HSPB11Q9Y547 144 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 NIPBLQ6KC79 2804 aaeCLIP4.76□□□□□ -1.65
FOXN3-215ENST00000557261 NAV3Q8IVL0 2385 aa4.76□□□□□ -1.65
FOXN3-215ENST00000557261 MALRD1Q5VYJ5 2156 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 FXYD6-FXYD2A0A087WZ82 144 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 IGHV2-26A0A0B4J1V2 119 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 IGHV3-43A0A0B4J1X8 118 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 MPTX1A8MV57 137 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 OOSP1A8MZH6 123 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 SMLR1H3BR10 107 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 K7EPK0 472 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 L7N2F9 121 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 TOR1AO14656 332 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 TAAR5O14804 337 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 ARPC5O15511 151 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 TNFSF12O43508 249 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 BCL2L11O43521 198 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 FOXH1O75593 365 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 CA1P00915 261 aaPredicted RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 IGKV1-39P01597 117 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 GAPDHP04406 335 aaKnown RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 IGKV1D-39P04432 117 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 IGHV3-43DP0DP04 118 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 NQO2P16083 231 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 CCL3L1P16619 93 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 PVALBP20472 110 aaPredicted RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 OMGP23515 440 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 PRTN3P24158 256 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 NUP62P37198 522 aaPredicted RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 P2RY1P47900 373 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 AKR1C2P52895 323 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 NKX2-5P52952 324 aaPredicted RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 RPL30P62888 115 aaKnown RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 PAX2Q02962 417 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 BAXQ07812 192 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF816Q0VGE8 651 aaPredicted RBP4.75□□□□□ -1.65
FOXN3-215ENST00000557261 RTL8BQ17RB0 113 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 HLA-DRB5Q30154 266 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 SP6Q3SY56 376 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 Q5BKY6 102 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 GPR157Q5UAW9 335 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF546Q86UE3 836 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 SLC51BQ86UW2 128 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF429Q86V71 674 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 PDPNQ86YL7 162 aa4.75□□□□□ -1.65
FOXN3-215ENST00000557261 SPAG16Q8N0X2 631 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms