RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 BSCL2Q96G97 398 aaPredicted RBP17.37■□□□□ 0.37
TDP1-216ENST00000556867 C7orf50Q9BRJ6 194 aaKnown RBP17.37■□□□□ 0.37
TDP1-216ENST00000556867 ENY2Q9NPA8 101 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 ZC4H2Q9NQZ6 224 aa17.37■□□□□ 0.37
TDP1-216ENST00000556867 PIGBOS1A0A0B4J2F0 54 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 C2orf70A6NJV1 201 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 CCR6P51684 374 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 PVRIGQ6DKI7 326 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 SPSB3Q6PJ21 355 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 ADAMTSL5Q6ZMM2 481 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 CENPSQ8N2Z9 138 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 CACFD1Q9UGQ2 172 aa17.36■□□□□ 0.37
TDP1-216ENST00000556867 OR2T8A6NH00 312 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 NDUFB6O95139 128 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 SULT1A3P0DMM9 295 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 SULT1A4P0DMN0 295 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 RNASE2P10153 161 aaKnown RBP17.35■□□□□ 0.37
TDP1-216ENST00000556867 FCGR2BP31994 310 aaPredicted RBP17.35■□□□□ 0.37
TDP1-216ENST00000556867 CNPY1Q3B7I2 92 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 LYZL2Q7Z4W2 148 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 OR2K2Q8NGT1 345 aa17.35■□□□□ 0.37
TDP1-216ENST00000556867 ZNF436Q9C0F3 470 aaPredicted RBP17.35■□□□□ 0.37
TDP1-216ENST00000556867 GAR1Q9NY12 217 aaKnown RBP17.35■□□□□ 0.37
TDP1-216ENST00000556867 DUXBA0A1W2PPF3 345 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 TMEM213A2RRL7 107 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 CENPXA8MT69 81 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 MT-CO2P00403 227 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 VAMP1P23763 118 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 BSXQ3C1V8 233 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 LCN12Q6JVE5 192 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 LRTM2Q8N967 370 aa17.34■□□□□ 0.37
TDP1-216ENST00000556867 LINC00854A0A1B0GVQ3 168 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 ZNF320A2RRD8 509 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 SFT2D2O95562 160 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 FOLR2P14207 255 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 BTCP35070 178 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 SUB1P53999 127 aaKnown RBP eCLIP17.33■□□□□ 0.36
TDP1-216ENST00000556867 MFAP4P55083 255 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 UBE2MP61081 183 aaKnown RBP17.33■□□□□ 0.36
TDP1-216ENST00000556867 PPP1R1AQ13522 171 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 Q56UQ5 140 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 UNQ9165/PRO28630Q6UXU0 137 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 TXN2Q99757 166 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 B9D2Q9BPU9 175 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 CHRDL1Q9BU40 450 aa17.33■□□□□ 0.36
TDP1-216ENST00000556867 IGHV3-35A0A0C4DH35 117 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 CORTO00230 105 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 EDN2P20800 178 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 ADMP35318 185 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 SMCO1Q147U7 214 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 ANKRD55Q3KP44 614 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 UBAC2Q8NBM4 344 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 DYNLRB2Q8TF09 96 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 TMEM190Q8WZ59 177 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 PINX1Q96BK5 328 aaKnown RBP17.32■□□□□ 0.36
TDP1-216ENST00000556867 PALMDQ9NP74 551 aa17.32■□□□□ 0.36
TDP1-216ENST00000556867 CBLN1P23435 193 aa17.31■□□□□ 0.36
TDP1-216ENST00000556867 ELLP55199 621 aaPredicted RBP17.31■□□□□ 0.36
TDP1-216ENST00000556867 CCDC32Q9BV29 185 aa17.31■□□□□ 0.36
TDP1-216ENST00000556867 TECRQ9NZ01 308 aaKnown RBP17.31■□□□□ 0.36
TDP1-216ENST00000556867 SMAD5-AS1Q9Y6J3 95 aa17.31■□□□□ 0.36
TDP1-216ENST00000556867 A0A1B0GU03 582 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 CEBPZOSA8MTT3 80 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 NDUFA4O00483 81 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 CTSGP08311 255 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 HTR2BP41595 481 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 DEFB114Q30KQ6 69 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 CD300EQ496F6 205 aaPredicted RBP17.3■□□□□ 0.36
TDP1-216ENST00000556867 CACNG8Q8WXS5 425 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 HEYLQ9NQ87 328 aaPredicted RBP17.3■□□□□ 0.36
TDP1-216ENST00000556867 HSPB7Q9UBY9 170 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 UFC1Q9Y3C8 167 aa17.3■□□□□ 0.36
TDP1-216ENST00000556867 IZUMO1RA6ND01 250 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 PLA2G10O15496 165 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 NUPL2O15504 423 aaKnown RBP17.29■□□□□ 0.36
TDP1-216ENST00000556867 IGHV3-48P01763 117 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 TNFRSF9Q07011 255 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 CD69Q07108 199 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 TM4SF20Q53R12 229 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 S100ZQ8WXG8 99 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 MARC2Q969Z3 335 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 PTTG2Q9NZH5 202 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 FLVCR2Q9UPI3 526 aa17.29■□□□□ 0.36
TDP1-216ENST00000556867 DNAH9Q9NYC9 4486 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 NXPH3O95157 252 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 C8orf88P0DMB2 117 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 SLC24A4Q8NFF2 622 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 ZNF414Q96IQ9 312 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 TMED3Q9Y3Q3 217 aa17.28■□□□□ 0.36
TDP1-216ENST00000556867 COL7A1Q02388 2944 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 C9orf170A2RU37 121 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 LYRM1O43325 122 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 GNG7O60262 68 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 SLC25A6P12236 298 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 NPBWR1P48145 328 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 RELQ04864 619 aaPredicted RBP17.27■□□□□ 0.36
TDP1-216ENST00000556867 C2orf83Q53S99 150 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 Q8N1Y9 231 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 UXS1Q8NBZ7 420 aa17.27■□□□□ 0.36
TDP1-216ENST00000556867 DUSP18Q8NEJ0 188 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms