RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 ZC4H2Q9NQZ6 224 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 C21orf62Q9NYP8 219 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 MRPL27Q9P0M9 148 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 MTFP1Q9UDX5 166 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 F11RQ9Y624 299 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 KMT2CQ8NEZ4 4911 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 TNCP24821 2201 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 MFSD2BA6NFX1 497 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 OR2T8A6NH00 312 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 C15orf61A6NNL5 157 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 OR11H12B2RN74 326 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 GABARAPH6UMI1 98 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 NUPL2O15504 423 aaKnown RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 TGOLN2O43493 480 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 RAB3DO95716 219 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 LYL1P12980 280 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 SUB1P53999 127 aaKnown RBP eCLIP5.54□□□□□ -1.521e-7■■■■□ 20.1
SCFD1-222ENST00000556768 ELLP55199 621 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 HSPE1P61604 102 aaKnown RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 RELQ04864 619 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 WT1-ASQ06250 92 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 MEF2DQ14814 521 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 TRIM16LQ309B1 348 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 Q56UQ5 140 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 RNASE12Q5GAN4 147 aaKnown RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 CLVS1Q8IUQ0 354 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 OR52B4Q8NGK2 314 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 OR1P1Q8NH06 330 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 MUC7Q8TAX7 377 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF502Q8TBZ5 544 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 ISOC1Q96CN7 298 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 DIRAS2Q96HU8 199 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 NAA50Q9GZZ1 169 aaKnown RBP5.54□□□□□ -1.52
SCFD1-222ENST00000556768 TMEM14BQ9NUH8 114 aa5.54□□□□□ -1.52
SCFD1-222ENST00000556768 TRAV25A0A0B4J276 109 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 IGHV3-35A0A0C4DH35 117 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 C3orf85A0A1B0GTC6 90 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 IZUMO1RA6ND01 250 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 CGB1A6NKQ9 187 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 A8MWP6 167 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 DISC1C4P0D8 188 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 YIF1AO95070 293 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 IFNA17P01571 189 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TMBIM6P55061 237 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 IL18Q14116 193 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 HAGHQ16775 308 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 RNF151Q2KHN1 245 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 STEAP1BQ6NZ63 245 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TMEM229BQ8NBD8 167 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SCARB1Q8WTV0 552 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 MRGPRFQ96AM1 343 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SEC22AQ96IW7 307 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 ABHD1Q96SE0 405 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 BCL7BQ9BQE9 202 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 C20orf24Q9BUV8 137 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 PLEKHA3Q9HB20 300 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 ENY2Q9NPA8 101 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 DAZ1Q9NQZ3 744 aaKnown RBP5.53□□□□□ -1.52
SCFD1-222ENST00000556768 C14orf166Q9Y224 244 aaKnown RBP5.53□□□□□ -1.52
SCFD1-222ENST00000556768 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 CEPT1Q9Y6K0 416 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TEX13DA0A0J9YY54 714 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TMEM213A2RRL7 107 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 NDUFA4O00483 81 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SCGB2A1O75556 95 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SCAF4O95104 1147 aaKnown RBP5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SMIM18P0DKX4 95 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 PI3P19957 117 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 MFAP4P55083 255 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 RND3P61587 244 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SLC35G3Q8N808 338 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 SCGB3A2Q96PL1 93 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 TXN2Q99757 166 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 C6orf62Q9GZU0 229 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-222ENST00000556768 CACFD1Q9UGQ2 172 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 KCNIP3Q9Y2W7 256 aa5.53□□□□□ -1.52
SCFD1-222ENST00000556768 IGHV3-21A0A0B4J1V1 117 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 CTDSP2O14595 271 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 BMI1P35226 326 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 RPL5P46777 297 aaKnown RBP5.52□□□□□ -1.53
SCFD1-222ENST00000556768 NPBWR1P48145 328 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 ALDH3B2P48448 385 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 PPP5CP53041 499 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 PRCDQ00LT1 54 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 BTNL8Q6UX41 500 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 UNQ9165/PRO28630Q6UXU0 137 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 ADAMTSL5Q6ZMM2 481 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 TMEM61Q8N0U2 210 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 DEFB125Q8N687 156 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 IL17DQ8TAD2 202 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 CACNG8Q8WXS5 425 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 PINX1Q96BK5 328 aaKnown RBP5.52□□□□□ -1.53
SCFD1-222ENST00000556768 PRRT1Q99946 306 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 THAP7Q9BT49 309 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-222ENST00000556768 C5orf66Q9H5L9 145 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 SRD5A3Q9H8P0 318 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 RSL24D1Q9UHA3 163 aaKnown RBP5.52□□□□□ -1.53
SCFD1-222ENST00000556768 SCP2D1Q9UJQ7 156 aa5.52□□□□□ -1.53
SCFD1-222ENST00000556768 PIGBOS1A0A0B4J2F0 54 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms