RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 RPEL1Q2QD12 228 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 IAH1Q2TAA2 248 aaPredicted RBP7.86□□□□□ -1.15
SHMT2-224ENST00000556737 ZNF585BQ52M93 769 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 CHAC2Q8WUX2 184 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 IL22RA2Q969J5 263 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 TMEM56Q96MV1 263 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 OR4C12Q96R67 309 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 ELOVL1Q9BW60 279 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 TMED3Q9Y3Q3 217 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 SMAD5-AS1Q9Y6J3 95 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 TMEM56-RWDD3S4R434 201 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 STAB2Q8WWQ8 2551 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 SORL1Q92673 2214 aa7.86□□□□□ -1.15
SHMT2-224ENST00000556737 DUXBA0A1W2PPF3 345 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 PPP5D1E7EU14 171 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 SMLR1H3BR10 107 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 NXPH3O95157 252 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 NDUFB8O95169 186 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 CDS2O95674 445 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 HNRNPCP07910 306 aaKnown RBP eCLIP7.85□□□□□ -1.15
SHMT2-224ENST00000556737 GIPP09681 153 aaPredicted RBP7.85□□□□□ -1.15
SHMT2-224ENST00000556737 S100A10P60903 97 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 LRRC37A5PQ49AS3 106 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 ADAMTSL5Q6ZMM2 481 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 H2BFWTQ7Z2G1 175 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 LRTM2Q8N967 370 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 OR1S1Q8NH92 325 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 C2orf50Q96LR7 162 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 ASCL2Q99929 193 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 SRSF8Q9BRL6 282 aaKnown RBP7.85□□□□□ -1.15
SHMT2-224ENST00000556737 AIFM2Q9BRQ8 373 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 FBXL7Q9UJT9 491 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 S4R3C0 116 aa7.85□□□□□ -1.15
SHMT2-224ENST00000556737 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 DBX1A6NMT0 343 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 MPTX1A8MV57 137 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 IGKV1-39P01597 117 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 IGHV3-23P01764 117 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 IGKV1D-39P04432 117 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 NHLRC4P0CG21 123 aaPredicted RBP7.84□□□□□ -1.15
SHMT2-224ENST00000556737 EDN2P20800 178 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 H2BFSP57053 126 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 RAP2BP61225 183 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 CYCSP99999 105 aaKnown RBP7.84□□□□□ -1.15
SHMT2-224ENST00000556737 WT1-ASQ06250 92 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 CD300CQ08708 224 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 SMCO1Q147U7 214 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 ZFP69Q49AA0 526 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 Q8N1Y9 231 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 OR10W1Q8NGF6 305 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 OR2T35Q8NGX2 323 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 ST6GAL2Q96JF0 529 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 OR10C1Q96KK4 312 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 NEURL2Q9BR09 285 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 QTRT1Q9BXR0 403 aaKnown RBP7.84□□□□□ -1.15
SHMT2-224ENST00000556737 FAM212BQ9NTI7 297 aaPredicted RBP7.84□□□□□ -1.15
SHMT2-224ENST00000556737 STARD9Q9P2P6 4700 aa7.84□□□□□ -1.15
SHMT2-224ENST00000556737 TENM3Q9P273 2699 aa7.84□□□□□ -1.16
SHMT2-224ENST00000556737 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 WRBO00258 174 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 IGKV1-5P01602 117 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 FRMD6-AS1P0C7T7 363 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 IZUMO4Q1ZYL8 232 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 SBSPONQ8IVN8 264 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 FAM219AQ8IW50 185 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 ZBTB8BQ8NAP8 495 aaPredicted RBP7.83□□□□□ -1.16
SHMT2-224ENST00000556737 OR4A16Q8NH70 328 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 GPR146Q96CH1 333 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 COMMD5Q9GZQ3 224 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 CACNG5Q9UF02 275 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 NSG2Q9Y328 171 aa7.83□□□□□ -1.16
SHMT2-224ENST00000556737 LSM5Q9Y4Y9 91 aaKnown RBP7.83□□□□□ -1.16
SHMT2-224ENST00000556737 RYR2Q92736 4967 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 TEX50A0A1B0GTY4 177 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 C15orf61A6NNL5 157 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 A8MWP6 167 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 BOLA2-SMG1P6H3BVE0 249 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 LGALS9O00182 355 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 GGCTO75223 188 aaKnown RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 SNAPC5O75971 98 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 PET100P0DJ07 73 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 IGHV4-30-4P0DP06 118 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 HIST1H1BP16401 226 aaKnown RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 EIF2B2P49770 351 aaKnown RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 MFAP2P55001 183 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 FGL1Q08830 312 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 FAM209BQ5JX69 171 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 CLEC19AQ6UXS0 136 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 TCTE3Q8IZS6 198 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 THAP6Q8TBB0 222 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 ASB13Q8WXK3 278 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 LSM10Q969L4 123 aaKnown RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 EEF1AKMT3Q96AZ1 226 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 WDR89Q96FK6 387 aaPredicted RBP7.82□□□□□ -1.16
SHMT2-224ENST00000556737 WWC2-AS2Q96NR7 200 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 NMES1Q9C002 83 aa7.82□□□□□ -1.16
SHMT2-224ENST00000556737 NDUFA4L2Q9NRX3 87 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms