RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MFSD2BA6NFX1 497 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 ADARB2-AS1A8MUL3 147 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 K7EPK0 472 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 L7N2F9 121 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 BRI3O95415 125 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 IGHV3-48P01763 117 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 VAMP2P63027 116 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 OR11H7Q8NGC8 314 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 C4orf3Q8WVX3 66 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 DUX3Q96PT4 197 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 PSENENQ9NZ42 101 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 U3KQ87 197 aa10.89□□□□□ -0.67
VIPAS39-208ENST00000556412 IFNA4P05014 189 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 OPRK1P41145 380 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 RPP30P78346 268 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 CYCSP99999 105 aaKnown RBP10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 UBAC2Q8NBM4 344 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 SPATA3Q8NHX4 192 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 EEF1AKMT3Q96AZ1 226 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 NMES1Q9C002 83 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 TENM1Q9UKZ4 2725 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 PLXNB1O43157 2135 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 MT-CO2P00403 227 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 BSXQ3C1V8 233 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 C2orf83Q53S99 150 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 NOXA1Q86UR1 476 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 TMEM170AQ8WVE7 144 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 CXorf58Q96LI9 332 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 RAB40CQ96S21 281 aa10.88□□□□□ -0.67
VIPAS39-208ENST00000556412 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 M0QZ24 198 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 CORTO00230 105 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 TMEM50AO95807 157 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 PVALBP20472 110 aaPredicted RBP10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 BCAP31P51572 246 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 RAB11AP62491 216 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 IL15RAQ13261 267 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 SCARB1Q8WTV0 552 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 PPP1R1CQ8WVI7 109 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 OR4C12Q96R67 309 aa10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 STRAPQ9Y3F4 350 aaKnown RBP10.87□□□□□ -0.67
VIPAS39-208ENST00000556412 C15orf62A8K5M9 175 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 K7EIM0 57 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 LY86O95711 162 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 PF4P02776 101 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 CAV2P51636 162 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 Q56UQ5 140 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 CLEC19AQ6UXS0 136 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 Q6ZNX1 250 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 OR11H1Q8NG94 326 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 OR4F17Q8NGA8 305 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 DPF1Q92782 380 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 SMIM8Q96KF7 97 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 OR4F4Q96R69 305 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 ZNF436Q9C0F3 470 aaPredicted RBP10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 ZC4H2Q9NQZ6 224 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 C21orf62Q9NYP8 219 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 TNCP24821 2201 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 I3L2K1 104 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 I3L521 148 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 TSPAN15O95858 294 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 TRBV12-3P01733 135 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 RLN2P04090 185 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 PAX9P55771 341 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 KLK9Q2XQG4 91 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 ZNF343Q6P1L6 599 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 ACSM6Q6P461 480 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 ETV3LQ6ZN32 361 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 OR1N2Q8NGR9 330 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 RNASEH2CQ8TDP1 164 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 VN1R17PQ8TDU5 208 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 RAX2Q96IS3 184 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 PEF1Q9UBV8 284 aaKnown RBP10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 KLK9Q9UKQ9 250 aa10.86□□□□□ -0.67
VIPAS39-208ENST00000556412 IGHV4OR15-8A0A075B7B6 117 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 A0A087WW49 117 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 TRBV7-1A0A0A6YYK4 115 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 CCL24O00175 119 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 GPR183P32249 361 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 MLANAQ16655 118 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 CCDC140Q96MF4 163 aa10.85□□□□□ -0.67
VIPAS39-208ENST00000556412 RPS10-NUDT3A0A1W2PQS6 291 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 OR2T8A6NH00 312 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 PPP5D1E7EU14 171 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 DEDDO75618 318 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 CLEC3BP05452 202 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 METTL15P1P0C7V9 234 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 TAS2R30P59541 319 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 FNDC4Q9H6D8 234 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 RANGRFQ9HD47 186 aaPredicted RBP10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 OR5AC2Q9NZP5 309 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 TSC22D2O75157 780 aa10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 HSPB1P04792 205 aaKnown RBP10.84□□□□□ -0.67
VIPAS39-208ENST00000556412 PET100P0DJ07 73 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms