RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 MFFQ9GZY8 342 aa6.14□□□□□ -1.43
PCNX4-210ENST00000555740 HIPK2Q9H2X6 1198 aa6.14□□□□□ -1.43
PCNX4-210ENST00000555740 STRAPQ9Y3F4 350 aaKnown RBP6.14□□□□□ -1.43
PCNX4-210ENST00000555740 NCBP2LA6PVI3 153 aaKnown RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 CYSRT1A8MQ03 144 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 TAAR5O14804 337 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 HOXA3O43365 443 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 ACTL6BO94805 426 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 NXPH3O95157 252 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 SRD5A1P18405 259 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 C4BPBP20851 252 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 NPY1RP25929 384 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 NUP62P37198 522 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 FXYD3Q14802 87 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 ASPHD1Q5U4P2 390 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 STX12Q86Y82 276 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 TTC9CQ8N5M4 171 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 OR1L6Q8NGR2 347 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 SMR3AQ99954 134 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 GGACTQ9BVM4 153 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 MAP1AP78559 2803 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 NSD1Q96L73 2696 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 DNAJC9-AS1A6NH13 148 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 CTRB1P17538 263 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 HILS1P60008 231 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 ERHP84090 104 aaKnown RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 CTRB2Q6GPI1 263 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 TMUB2Q71RG4 321 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 OR1P1Q8NH06 330 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 STOML3Q8TAV4 291 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 FAM110DQ8TAY7 271 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 RNASEH2CQ8TDP1 164 aaKnown RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 HEYLQ9NQ87 328 aaPredicted RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 FBXO7Q9Y3I1 522 aa6.13□□□□□ -1.43
PCNX4-210ENST00000555740 F11RQ9Y624 299 aaKnown RBP6.13□□□□□ -1.43
PCNX4-210ENST00000555740 FLNBO75369 2602 aaKnown RBP6.12□□□□□ -1.43
PCNX4-210ENST00000555740 CSPG4Q6UVK1 2322 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 FAM24AA6NFZ4 105 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 H3BUA1 57 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 S100A11P31949 105 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 NKX2-5P52952 324 aaPredicted RBP6.12□□□□□ -1.43
PCNX4-210ENST00000555740 DLK1P80370 383 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 CFHR3Q02985 330 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 LY6EQ16553 131 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 SPINK9Q5DT21 86 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 P2RX4Q99571 388 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 ARV1Q9H2C2 271 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 SEPSECSQ9HD40 501 aaKnown RBP6.12□□□□□ -1.43
PCNX4-210ENST00000555740 FBXL17Q9UF56 701 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 HIVEP1P15822 2718 aa6.12□□□□□ -1.43
PCNX4-210ENST00000555740 CORTO00230 105 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ATP6V0E1O15342 81 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 FAM157CP0CG43 387 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 AREGP15514 252 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 CAV2P51636 162 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 SUB1P53999 127 aaKnown RBP eCLIP6.11□□□□□ -1.43
PCNX4-210ENST00000555740 RAB11AP62491 216 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 GNB1P62873 340 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 HBG1P69891 147 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 HBG2P69892 147 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ATP6V1FQ16864 119 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 AKIRIN2Q53H80 203 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 OR10W1Q8NGF6 305 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 PINX1Q96BK5 328 aaKnown RBP6.11□□□□□ -1.43
PCNX4-210ENST00000555740 NPFFR1Q9GZQ6 430 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ZNF702PQ9H963 129 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 CYTL1Q9NRR1 136 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ACANP16112 2415 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 TMEM89A2RUT3 159 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 CRLF1O75462 422 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 CNIH1O95406 144 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 OR8U8P0C7N1 319 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 MDKP21741 143 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ARL16Q0P5N6 197 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 TMEM267Q0VDI3 215 aaPredicted RBP6.11□□□□□ -1.43
PCNX4-210ENST00000555740 EXOSC2Q13868 293 aaKnown RBP6.11□□□□□ -1.43
PCNX4-210ENST00000555740 SPANXN5Q5MJ07 72 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 C22orf15Q8WYQ4 148 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ATP5SQ99766 215 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 ESM1Q9NQ30 184 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 NOTCH2Q04721 2471 aa6.11□□□□□ -1.43
PCNX4-210ENST00000555740 IGLV11-55A0A075B6I3 123 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 H3BP45 60 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 DFFBO76075 338 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 OR13C7P0DN81 318 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 HIST1H1BP16401 226 aaKnown RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 GPX4P36969 197 aaPredicted RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 MFAP2P55001 183 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 SLC38A11Q08AI6 406 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 OPCMLQ14982 345 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 RBMS3Q6XE24 437 aaKnown RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 SLC35E3Q7Z769 313 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 ZNF418Q8TF45 676 aaPredicted RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 BSCL2Q96G97 398 aaPredicted RBP6.1□□□□□ -1.43
PCNX4-210ENST00000555740 TMEM147Q9BVK8 224 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 PARP11Q9NR21 331 aa6.1□□□□□ -1.43
PCNX4-210ENST00000555740 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms