RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ETV6P41212 452 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 ERHP84090 104 aaKnown RBP15.46■□□□□ 0.07
VTI1B-205ENST00000555543 DHODHQ02127 395 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 Q56UQ5 140 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 SPSB3Q6PJ21 355 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 SGPP2Q8IWX5 399 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 TOMM5Q8N4H5 51 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 UXS1Q8NBZ7 420 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 TMEM190Q8WZ59 177 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 WDR89Q96FK6 387 aaPredicted RBP15.46■□□□□ 0.07
VTI1B-205ENST00000555543 ATP6V0BQ99437 205 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 C19orf73Q9NVV2 129 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 TECRQ9NZ01 308 aaKnown RBP15.46■□□□□ 0.07
VTI1B-205ENST00000555543 U3KQK5 164 aa15.46■□□□□ 0.07
VTI1B-205ENST00000555543 INS-IGF2F8WCM5 200 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 MT-CO2P00403 227 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 SUPT4H1P63272 117 aaKnown RBP15.45■□□□□ 0.06
VTI1B-205ENST00000555543 TMEM187Q14656 261 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 AARDQ4LEZ3 155 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 GTSCR1Q86UQ5 136 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 FAM219AQ8IW50 185 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 GALNT14Q96FL9 552 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 TMEM56-RWDD3S4R434 201 aa15.45■□□□□ 0.06
VTI1B-205ENST00000555543 IGHV3OR16-8A0A075B7F1 116 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 A8MZ25 164 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 CTSGP08311 255 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 C8orf88P0DMB2 117 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 AKR1C4P17516 323 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 FAUP35544 74 aaKnown RBP15.44■□□□□ 0.06
VTI1B-205ENST00000555543 HOXA1P49639 335 aaPredicted RBP15.44■□□□□ 0.06
VTI1B-205ENST00000555543 AP3S2P59780 193 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 BTNL8Q6UX41 500 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 TMEM61Q8N0U2 210 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 PINX1Q96BK5 328 aaKnown RBP15.44■□□□□ 0.06
VTI1B-205ENST00000555543 GPR146Q96CH1 333 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 SCGB3A2Q96PL1 93 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 PDCD10Q9BUL8 212 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 SRRQ9GZT4 340 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 PALMDQ9NP74 551 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 CACNG5Q9UF02 275 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 UFC1Q9Y3C8 167 aa15.44■□□□□ 0.06
VTI1B-205ENST00000555543 CD7P09564 240 aa15.43■□□□□ 0.06
VTI1B-205ENST00000555543 RNASE2P10153 161 aaKnown RBP15.43■□□□□ 0.06
VTI1B-205ENST00000555543 CD81P60033 236 aa15.43■□□□□ 0.06
VTI1B-205ENST00000555543 GUCA2BQ16661 112 aa15.43■□□□□ 0.06
VTI1B-205ENST00000555543 SPANXN2Q5MJ10 180 aa15.43■□□□□ 0.06
VTI1B-205ENST00000555543 PVRIGQ6DKI7 326 aa15.43■□□□□ 0.06
VTI1B-205ENST00000555543 NDUFA4O00483 81 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 FCGR2BP31994 310 aaPredicted RBP15.42■□□□□ 0.06
VTI1B-205ENST00000555543 SNCAP37840 140 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 MFAP4P55083 255 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 ELLP55199 621 aaPredicted RBP15.42■□□□□ 0.06
VTI1B-205ENST00000555543 ZNF57Q68EA5 555 aaPredicted RBP15.42■□□□□ 0.06
VTI1B-205ENST00000555543 IL22RA2Q969J5 263 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 WFDC10AQ9H1F0 79 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.42■□□□□ 0.06
VTI1B-205ENST00000555543 DNAH7Q8WXX0 4024 aa15.42■□□□□ 0.06
VTI1B-205ENST00000555543 SPCS3P61009 180 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 BSXQ3C1V8 233 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 S100ZQ8WXG8 99 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 MARC2Q969Z3 335 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 WWC2-AS2Q96NR7 200 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 NEURL2Q9BR09 285 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 DAZ1Q9NQZ3 744 aaKnown RBP15.41■□□□□ 0.06
VTI1B-205ENST00000555543 MRPL27Q9P0M9 148 aaKnown RBP15.41■□□□□ 0.06
VTI1B-205ENST00000555543 KCNIP3Q9Y2W7 256 aa15.41■□□□□ 0.06
VTI1B-205ENST00000555543 ZNF207O43670 478 aaKnown RBP15.4■□□□□ 0.06
VTI1B-205ENST00000555543 SCAF4O95104 1147 aaKnown RBP15.4■□□□□ 0.06
VTI1B-205ENST00000555543 NXPH3O95157 252 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 TMED4Q7Z7H5 227 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 OR52E5Q8NH55 327 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 TXN2Q99757 166 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 C20orf24Q9BUV8 137 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 ENY2Q9NPA8 101 aa15.4■□□□□ 0.06
VTI1B-205ENST00000555543 NUPL2O15504 423 aaKnown RBP15.39■□□□□ 0.05
VTI1B-205ENST00000555543 BAK1Q16611 211 aa15.39■□□□□ 0.05
VTI1B-205ENST00000555543 NMSQ5H8A3 153 aa15.39■□□□□ 0.05
VTI1B-205ENST00000555543 LYZL2Q7Z4W2 148 aa15.39■□□□□ 0.05
VTI1B-205ENST00000555543 DEDD2Q8WXF8 326 aa15.39■□□□□ 0.05
VTI1B-205ENST00000555543 RCHY1Q96PM5 261 aa15.39■□□□□ 0.05
VTI1B-205ENST00000555543 SDHCQ99643 169 aaPredicted RBP15.39■□□□□ 0.05
VTI1B-205ENST00000555543 FNDC4Q9H6D8 234 aaPredicted RBP15.39■□□□□ 0.05
VTI1B-205ENST00000555543 GAR1Q9NY12 217 aaKnown RBP15.39■□□□□ 0.05
VTI1B-205ENST00000555543 MRPL36Q9P0J6 103 aaKnown RBP15.39■□□□□ 0.05
VTI1B-205ENST00000555543 A0A0B4J2A0 478 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 GNG7O60262 68 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 ZNF846Q147U1 533 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 DEFB125Q8N687 156 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 TM2D3Q9BRN9 247 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 WDR12Q9GZL7 423 aaKnown RBP15.38■□□□□ 0.05
VTI1B-205ENST00000555543 TUBA4BQ9H853 241 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 SHPKQ9UHJ6 478 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 NBEAL2Q6ZNJ1 2754 aa15.38■□□□□ 0.05
VTI1B-205ENST00000555543 KMT2CQ8NEZ4 4911 aaKnown RBP15.38■□□□□ 0.05
VTI1B-205ENST00000555543 SULT1A3P0DMM9 295 aa15.37■□□□□ 0.05
VTI1B-205ENST00000555543 SULT1A4P0DMN0 295 aa15.37■□□□□ 0.05
VTI1B-205ENST00000555543 SUB1P53999 127 aaKnown RBP eCLIP15.37■□□□□ 0.05
VTI1B-205ENST00000555543 RELQ04864 619 aaPredicted RBP15.37■□□□□ 0.05
VTI1B-205ENST00000555543 MLANAQ16655 118 aa15.37■□□□□ 0.05
VTI1B-205ENST00000555543 C15orf62A8K5M9 175 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 420.8 ms