RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
SNX6-203ENST00000555416 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
SNX6-203ENST00000555416 MLXQ9UH92 298 aa10.32□□□□□ -0.76
SNX6-203ENST00000555416 INS-IGF2F8WCM5 200 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 CYB5BO43169 146 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 ATG12O94817 140 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 CTSGP08311 255 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 FRMD6-AS1P0C7T7 363 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 RNASE2P10153 161 aaKnown RBP10.31□□□□□ -0.76
SNX6-203ENST00000555416 MLANAQ16655 118 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 FAM106AQ4KMX7 169 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 SPANXN2Q5MJ10 180 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 PVRIGQ6DKI7 326 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 LCN12Q6JVE5 192 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 TMED4Q7Z7H5 227 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 UXS1Q8NBZ7 420 aa10.31□□□□□ -0.76
SNX6-203ENST00000555416 PINX1Q96BK5 328 aaKnown RBP10.31□□□□□ -0.76
SNX6-203ENST00000555416 WDR89Q96FK6 387 aaPredicted RBP10.31□□□□□ -0.76
SNX6-203ENST00000555416 NXPH3O95157 252 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 IGHV4-30-4P0DP06 118 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 FAUP35544 74 aaKnown RBP10.3□□□□□ -0.76
SNX6-203ENST00000555416 HOXA1P49639 335 aaPredicted RBP10.3□□□□□ -0.76
SNX6-203ENST00000555416 AP3S2P59780 193 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 ERHP84090 104 aaKnown RBP10.3□□□□□ -0.76
SNX6-203ENST00000555416 Q56UQ5 140 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 LYZL2Q7Z4W2 148 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 FAM219AQ8IW50 185 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 OR1L6Q8NGR2 347 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 DYNLRB2Q8TF09 96 aa10.3□□□□□ -0.76
SNX6-203ENST00000555416 BSCL2Q96G97 398 aaPredicted RBP10.3□□□□□ -0.76
SNX6-203ENST00000555416 MRPL36Q9P0J6 103 aaKnown RBP10.3□□□□□ -0.76
SNX6-203ENST00000555416 TENM3Q9P273 2699 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 ZNF207O43670 478 aaKnown RBP10.29□□□□□ -0.76
SNX6-203ENST00000555416 CD7P09564 240 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 C8orf88P0DMB2 117 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 CCR6P51684 374 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 SPCS3P61009 180 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 BSXQ3C1V8 233 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 ANKRD55Q3KP44 614 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 NMSQ5H8A3 153 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 ZNF57Q68EA5 555 aaPredicted RBP10.29□□□□□ -0.76
SNX6-203ENST00000555416 BTNL8Q6UX41 500 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 TMEM61Q8N0U2 210 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 OR2K2Q8NGT1 345 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 TMEM170AQ8WVE7 144 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 TMEM190Q8WZ59 177 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 IL22RA2Q969J5 263 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 SCGB3A2Q96PL1 93 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 WFDC10AQ9H1F0 79 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 FNDC4Q9H6D8 234 aaPredicted RBP10.29□□□□□ -0.76
SNX6-203ENST00000555416 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
SNX6-203ENST00000555416 C19orf73Q9NVV2 129 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 KCNIP3Q9Y2W7 256 aa10.29□□□□□ -0.76
SNX6-203ENST00000555416 LINC00854A0A1B0GVQ3 168 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 BTCP35070 178 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 SNCAP37840 140 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 MFAP4P55083 255 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 OR52E5Q8NH55 327 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 ATP6V0BQ99437 205 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 TECRQ9NZ01 308 aaKnown RBP10.28□□□□□ -0.76
SNX6-203ENST00000555416 NDUFA13Q9P0J0 144 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 FLVCR2Q9UPI3 526 aa10.28□□□□□ -0.76
SNX6-203ENST00000555416 SCAF4O95104 1147 aaKnown RBP10.27□□□□□ -0.77
SNX6-203ENST00000555416 FCGR2BP31994 310 aaPredicted RBP10.27□□□□□ -0.77
SNX6-203ENST00000555416 PPP1R1AQ13522 171 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 GUCA2BQ16661 112 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 TMEM128Q5BJH2 165 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 SLC25A21Q9BQT8 299 aaPredicted RBP10.27□□□□□ -0.77
SNX6-203ENST00000555416 C20orf24Q9BUV8 137 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 UFC1Q9Y3C8 167 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.77
SNX6-203ENST00000555416 A0A0B4J2A0 478 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 A8MZ25 164 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 NDUFA4O00483 81 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 NHLRC4P0CG21 123 aaPredicted RBP10.26□□□□□ -0.77
SNX6-203ENST00000555416 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 IL7P13232 177 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 VAMP1P23763 118 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 ELLP55199 621 aaPredicted RBP10.26□□□□□ -0.77
SNX6-203ENST00000555416 CD81P60033 236 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 LGI3Q8N145 548 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 DEDD2Q8WXF8 326 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 TXN2Q99757 166 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 PALMDQ9NP74 551 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 ENY2Q9NPA8 101 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 SHPKQ9UHJ6 478 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 U3KQK5 164 aa10.26□□□□□ -0.77
SNX6-203ENST00000555416 IGHV3-49A0A0A0MS15 119 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 CEBPZOSA8MTT3 80 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 NUPL2O15504 423 aaKnown RBP10.25□□□□□ -0.77
SNX6-203ENST00000555416 NDUFB6O95139 128 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 SFT2D2O95562 160 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 TNFRSF9Q07011 255 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 SMCO1Q147U7 214 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 TRIQKQ629K1 86 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
SNX6-203ENST00000555416 DEFB125Q8N687 156 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms