RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 C14orf166Q9Y224 244 aaKnown RBP8.88□□□□□ -0.99
VRK1-204ENST00000555351 HUWE1Q7Z6Z7 4374 aaKnown RBP8.88□□□□□ -0.99
VRK1-204ENST00000555351 A0A0B4J293 547 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 LYL1P12980 280 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 SNCAP37840 140 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 PPP5CP53041 499 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 SUB1P53999 127 aaKnown RBP eCLIP8.87□□□□□ -0.993e-6■□□□□ 8.1
VRK1-204ENST00000555351 DHODHQ02127 395 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 IL18Q14116 193 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 SCGB2B2Q4G0G5 96 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 Q56UQ5 140 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 MARCH1Q8TCQ1 289 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 OR10C1Q96KK4 312 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 PDCD10Q9BUL8 212 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 NXF2Q9GZY0 626 aaKnown RBP8.87□□□□□ -0.99
VRK1-204ENST00000555351 TMEM222Q9H0R3 208 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 HIPK2Q9H2X6 1198 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
VRK1-204ENST00000555351 NBEAL2Q6ZNJ1 2754 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 ANKRD20A5PA0PJZ0 165 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 RBMY1BA6NDE4 496 aaKnown RBP8.86□□□□□ -0.99
VRK1-204ENST00000555351 RBMY1EA6NEQ0 496 aaKnown RBP8.86□□□□□ -0.99
VRK1-204ENST00000555351 H3BMQ9 156 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 MT-CO2P00403 227 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 CD5P06127 495 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 RBMY1DP0C7P1 496 aaKnown RBP8.86□□□□□ -0.99
VRK1-204ENST00000555351 NPBWR1P48145 328 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 TRIM16LQ309B1 348 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 SLC35G3Q8N808 338 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 UBAC2Q8NBM4 344 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 OR52E5Q8NH55 327 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 GLYATL2Q8WU03 294 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 MISP3Q96FF7 219 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 SCGB3A2Q96PL1 93 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 SOSTQ9BQB4 213 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 RTBDNQ9BSG5 229 aaPredicted RBP8.86□□□□□ -0.99
VRK1-204ENST00000555351 SLIRPQ9GZT3 109 aaKnown RBP8.86□□□□□ -0.99
VRK1-204ENST00000555351 SMPXQ9UHP9 88 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 GPR132Q9UNW8 380 aa8.86□□□□□ -0.99
VRK1-204ENST00000555351 PIGBOS1A0A0B4J2F0 54 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 IGHV3-35A0A0C4DH35 117 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 TEX13DA0A0J9YY54 714 aaPredicted RBP8.85□□□□□ -0.99
VRK1-204ENST00000555351 OR4C46A6NHA9 309 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 ST8SIA3O43173 380 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 SCAF4O95104 1147 aaKnown RBP8.85□□□□□ -0.99
VRK1-204ENST00000555351 IFNA17P01571 189 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 BSXQ3C1V8 233 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 DUSP18Q8NEJ0 188 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 OR4C16Q8NGL9 310 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 DEDD2Q8WXF8 326 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 RBPMSQ93062 196 aaKnown RBP8.85□□□□□ -0.99
VRK1-204ENST00000555351 NAA60Q9H7X0 242 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.85□□□□□ -0.99
VRK1-204ENST00000555351 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
VRK1-204ENST00000555351 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
VRK1-204ENST00000555351 LOC102724200A0A096LPH7 203 aaPredicted RBP8.84□□□□□ -0.99
VRK1-204ENST00000555351 IGHV3-21A0A0B4J1V1 117 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 CRYM-AS1A6NIL9 109 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 GNG7O60262 68 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 OR5AC1P0C628 307 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 BMI1P35226 326 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
VRK1-204ENST00000555351 SPCS3P61009 180 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 IZUMO4Q1ZYL8 232 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 SP6Q3SY56 376 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 IL22RA2Q969J5 263 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 GALNT14Q96FL9 552 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 ZNF414Q96IQ9 312 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 GINS3Q9BRX5 216 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 C20orf24Q9BUV8 137 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 GGTLC1Q9BX51 225 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 C6orf62Q9GZU0 229 aaPredicted RBP8.84□□□□□ -0.99
VRK1-204ENST00000555351 ENY2Q9NPA8 101 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 KCNIP3Q9Y2W7 256 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 TMEM56-RWDD3S4R434 201 aa8.84□□□□□ -0.99
VRK1-204ENST00000555351 IGHV7-4-1A0A0J9YVY3 117 aa8.83□□□□□ -1
VRK1-204ENST00000555351 FABP12A6NFH5 140 aa8.83□□□□□ -1
VRK1-204ENST00000555351 SCGB2A1O75556 95 aa8.83□□□□□ -1
VRK1-204ENST00000555351 RNASE2P10153 161 aaKnown RBP8.83□□□□□ -1
VRK1-204ENST00000555351 TNFSF8P32971 234 aa8.83□□□□□ -1
VRK1-204ENST00000555351 FAAP20Q6NZ36 180 aa8.83□□□□□ -1
VRK1-204ENST00000555351 SELENOHQ8IZQ5 122 aaKnown RBP8.83□□□□□ -1
VRK1-204ENST00000555351 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
VRK1-204ENST00000555351 OR51S1Q8NGJ8 323 aa8.83□□□□□ -1
VRK1-204ENST00000555351 MCFD2Q8NI22 146 aa8.83□□□□□ -1
VRK1-204ENST00000555351 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
VRK1-204ENST00000555351 PINX1Q96BK5 328 aaKnown RBP8.83□□□□□ -1
VRK1-204ENST00000555351 WFDC10AQ9H1F0 79 aa8.83□□□□□ -1
VRK1-204ENST00000555351 TRAV14DV4A0A0A6YYC5 116 aa8.82□□□□□ -1
VRK1-204ENST00000555351 KIR2DL5BA0A0G2JN68 375 aa8.82□□□□□ -1
VRK1-204ENST00000555351 KIR2DL5BA0A0G2JPC4 375 aa8.82□□□□□ -1
VRK1-204ENST00000555351 A0A0G2JRQ6 117 aa8.82□□□□□ -1
VRK1-204ENST00000555351 UBE2CO00762 179 aa8.82□□□□□ -1
VRK1-204ENST00000555351 CHEK1O14757 476 aa8.82□□□□□ -1
VRK1-204ENST00000555351 FAUP35544 74 aaKnown RBP8.82□□□□□ -1
VRK1-204ENST00000555351 ETV6P41212 452 aa8.82□□□□□ -1
VRK1-204ENST00000555351 HTR2BP41595 481 aa8.82□□□□□ -1
VRK1-204ENST00000555351 HOXA1P49639 335 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms