RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CORTO00230 105 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 TGOLN2O43493 480 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 IGLV1-51P01701 117 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 CSN3P07498 182 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 IL7P13232 177 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 GP9P14770 177 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 CCR6P51684 374 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 MFAP2P55001 183 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 CD69Q07108 199 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 OR52E5Q8NH55 327 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 SCARB1Q8WTV0 552 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 GPR146Q96CH1 333 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 ATP6V0BQ99437 205 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 HEYLQ9NQ87 328 aaPredicted RBP9.23□□□□□ -0.93
SRP54-206ENST00000555317 PRR13Q9NZ81 148 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 SHPKQ9UHJ6 478 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 K7EIM0 57 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 NUPL2O15504 423 aaKnown RBP9.22□□□□□ -0.93
SRP54-206ENST00000555317 SCGB2A1O75556 95 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 MFAP4P55083 255 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 UBE2MP61081 183 aaKnown RBP9.22□□□□□ -0.93
SRP54-206ENST00000555317 SUPT4H1P63272 117 aaKnown RBP9.22□□□□□ -0.93
SRP54-206ENST00000555317 OR1S1Q8NH92 325 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 S100ZQ8WXG8 99 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 HIPK2Q9H2X6 1198 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 SIGLEC8Q9NYZ4 499 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 UFC1Q9Y3C8 167 aa9.22□□□□□ -0.93
SRP54-206ENST00000555317 IGHV3-35A0A0C4DH35 117 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 C2orf70A6NJV1 201 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 INS-IGF2F8WCM5 200 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 GNG7O60262 68 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 NDUFB6O95139 128 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 NXPH3O95157 252 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 MT-CO2P00403 227 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 FOLR2P14207 255 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 HTR2BP41595 481 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 RELQ04864 619 aaPredicted RBP9.21□□□□□ -0.94
SRP54-206ENST00000555317 SMCO1Q147U7 214 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 CNPY1Q3B7I2 92 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 IL34Q6ZMJ4 242 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 Q6ZRM9 215 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 LYZL2Q7Z4W2 148 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 GTSCR1Q86UQ5 136 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 DUSP18Q8NEJ0 188 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 OR2K2Q8NGT1 345 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 SDHCQ99643 169 aaPredicted RBP9.21□□□□□ -0.94
SRP54-206ENST00000555317 TXN2Q99757 166 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 TECRQ9NZ01 308 aaKnown RBP9.21□□□□□ -0.94
SRP54-206ENST00000555317 SMAD5-AS1Q9Y6J3 95 aa9.21□□□□□ -0.94
SRP54-206ENST00000555317 A8MWP6 167 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 I3L2K1 104 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 SFT2D2O95562 160 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 OPRK1P41145 380 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 NPBWR1P48145 328 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 AARDQ4LEZ3 155 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 NMSQ5H8A3 153 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 LINC00299Q6ZSB3 139 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 NOXA1Q86UR1 476 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 MARC2Q969Z3 335 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 C20orf24Q9BUV8 137 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 CCDC32Q9BV29 185 aa9.2□□□□□ -0.94
SRP54-206ENST00000555317 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 A0A1B0GU03 582 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 RPS10-NUDT3A0A1W2PQS6 291 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 A6NHS1 94 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 NDUFA4O00483 81 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 YIF1AO95070 293 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 IGHV3-48P01763 117 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 RNASE2P10153 161 aaKnown RBP9.19□□□□□ -0.94
SRP54-206ENST00000555317 TNFRSF9Q07011 255 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 C4orf46Q504U0 113 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 SLC24A4Q8NFF2 622 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 COQ8AQ8NI60 647 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 CHRDL1Q9BU40 450 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 ZNF436Q9C0F3 470 aaPredicted RBP9.19□□□□□ -0.94
SRP54-206ENST00000555317 DAZ1Q9NQZ3 744 aaKnown RBP9.19□□□□□ -0.94
SRP54-206ENST00000555317 BATF3Q9NR55 127 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 PTTG2Q9NZH5 202 aa9.19□□□□□ -0.94
SRP54-206ENST00000555317 TMEM213A2RRL7 107 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 LYRM1O43325 122 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 IFNA10P01566 189 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 CBLN1P23435 193 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 FCGR2BP31994 310 aaPredicted RBP9.18□□□□□ -0.94
SRP54-206ENST00000555317 ELLP55199 621 aaPredicted RBP9.18□□□□□ -0.94
SRP54-206ENST00000555317 GUCA2BQ16661 112 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 ANKRD55Q3KP44 614 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 CD300EQ496F6 205 aaPredicted RBP9.18□□□□□ -0.94
SRP54-206ENST00000555317 TM4SF20Q53R12 229 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 UNQ9165/PRO28630Q6UXU0 137 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 LRTM2Q8N967 370 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 UXS1Q8NBZ7 420 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 DTD1Q8TEA8 209 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 CACNG8Q8WXS5 425 aa9.18□□□□□ -0.94
SRP54-206ENST00000555317 WDR12Q9GZL7 423 aaKnown RBP9.18□□□□□ -0.94
SRP54-206ENST00000555317 HSPB7Q9UBY9 170 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms