RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 K7N7A8 449 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 PRSS8Q16651 343 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 COMMD5Q9GZQ3 224 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 TRBV24-1A0A075B6N3 115 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 PPOXP50336 477 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 ERVK11-1P61568 191 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 TMEM252Q8N6L7 170 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 MSI2Q96DH6 328 aaKnown RBP13.73□□□□□ -0.21
PCNX1-209ENST00000554879 TECRQ9NZ01 308 aaKnown RBP13.73□□□□□ -0.21
PCNX1-209ENST00000554879 ANAPC10Q9UM13 185 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 COX11Q9Y6N1 276 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 ARHGAP21Q5T5U3 1957 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 EPG5Q9HCE0 2579 aa13.73□□□□□ -0.21
PCNX1-209ENST00000554879 UCP1P25874 307 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 ZBTB34Q8NCN2 500 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 OR8B3Q8NGG8 313 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 OR4S2Q8NH73 311 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 CLDND2Q8NHS1 167 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 OR8B2Q96RD0 313 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 GSX1Q9H4S2 264 aaPredicted RBP13.72□□□□□ -0.21
PCNX1-209ENST00000554879 RPRMQ9NS64 109 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 C11orf53Q8IXP5 236 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 IDI2-AS1Q9NZ38 188 aa13.72□□□□□ -0.21
PCNX1-209ENST00000554879 GAGE12BA1L429 117 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 RAMP3O60896 148 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 WFDC12Q8WWY7 111 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 JPT1Q9UK76 154 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 TBL2Q9Y4P3 447 aaKnown RBP13.71□□□□□ -0.21
PCNX1-209ENST00000554879 DSPP15924 2871 aaKnown RBP13.71□□□□□ -0.21
PCNX1-209ENST00000554879 LOC102723971A0A1B0GUV8 181 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 TMEM186Q96B77 213 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
PCNX1-209ENST00000554879 CHTOPQ9Y3Y2 248 aaKnown RBP13.71□□□□□ -0.21
PCNX1-209ENST00000554879 J3QR89 54 aa13.71□□□□□ -0.22
PCNX1-209ENST00000554879 PCSK4Q6UW60 755 aa13.71□□□□□ -0.22
PCNX1-209ENST00000554879 ANAPC16Q96DE5 110 aa13.71□□□□□ -0.22
PCNX1-209ENST00000554879 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.22
PCNX1-209ENST00000554879 MRPL54Q6P161 138 aaKnown RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 RPEQ96AT9 228 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 WDR61Q9GZS3 305 aaKnown RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 SLC38A11Q08AI6 406 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 PTPRBP23467 1997 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 CNIH1O95406 144 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 THBDP07204 575 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 APELAP0DMC3 54 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 NUP37Q8NFH4 326 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 OR1N2Q8NGR9 330 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 KMT2EQ8IZD2 1858 aa13.7□□□□□ -0.22
PCNX1-209ENST00000554879 GPR6P46095 362 aaPredicted RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 MEF2BQ02080 365 aaPredicted RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 SEPSECSQ9HD40 501 aaKnown RBP13.7□□□□□ -0.22
PCNX1-209ENST00000554879 KBTBD11-OT1A0A1B0GTJ5 212 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 A1L4Q6 167 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 M0R2Z0 102 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 ARF6P62330 175 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 RAB31Q13636 194 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 PTPN13Q12923 2485 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 NEIL1Q96FI4 390 aaPredicted RBP13.69□□□□□ -0.22
PCNX1-209ENST00000554879 SCGB2A1O75556 95 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 HARBI1Q96MB7 349 aa13.69□□□□□ -0.22
PCNX1-209ENST00000554879 LCN12Q6JVE5 192 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 UHRF2Q96PU4 802 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 ZNF331Q9NQX6 463 aaPredicted RBP13.68□□□□□ -0.22
PCNX1-209ENST00000554879 OR10W1Q8NGF6 305 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 C18orf12Q96KH6 178 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 IGLV3-9A0A075B6K5 115 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 IGSF23A1L1A6 192 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 CEACAM18A8MTB9 384 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 C11orf94C9JXX5 98 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 MORN2Q502X0 79 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 DOPEY2Q9Y3R5 2298 aa13.68□□□□□ -0.22
PCNX1-209ENST00000554879 ADMP35318 185 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 SRSF4Q08170 494 aaKnown RBP13.67□□□□□ -0.22
PCNX1-209ENST00000554879 ZNF841Q6ZN19 808 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 PLEKHA3Q9HB20 300 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 RPL30P62888 115 aaKnown RBP13.67□□□□□ -0.22
PCNX1-209ENST00000554879 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 FAM157AC9JC47 383 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 LYPD2Q6UXB3 125 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 OR10G8Q8NGN5 311 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 FRYQ5TBA9 3013 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 OR2T8A6NH00 312 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 TMEM56Q96MV1 263 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 TMEM56-RWDD3S4R434 201 aa13.67□□□□□ -0.22
PCNX1-209ENST00000554879 PGPEP1LA6NFU8 196 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 SAP30O75446 220 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 NDUFB4O95168 129 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 RPL23P62829 140 aaKnown RBP13.66□□□□□ -0.22
PCNX1-209ENST00000554879 LOC400499M0QZD8 3231 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 PPIAL4CA0A0B4J2A2 164 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 TMEM178BH3BS89 294 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 PPIAL4GP0DN37 164 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 ADTRPQ96IZ2 230 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 MPV17L2Q567V2 206 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 NRN1Q9NPD7 142 aa13.66□□□□□ -0.22
PCNX1-209ENST00000554879 TRAV30A0A087WSZ9 112 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 TRBV6-6A0A0A6YYG2 114 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 A0A1W2PN81 502 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms