RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 MFAP4P55083 255 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 LSM3P62310 102 aaKnown RBP8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 KCTD21Q4G0X4 260 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 TBC1D26Q86UD7 250 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 RPP25LQ8N5L8 163 aaKnown RBP8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 ZNF114Q8NC26 417 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 TMEM116Q8NCL8 245 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 PHLDA1Q8WV24 401 aaPredicted RBP8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 SLC25A46Q96AG3 418 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 TXN2Q99757 166 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 CSTL1Q9H114 145 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 HECTD4Q9Y4D8 3996 aa8.97□□□□□ -0.97
MTHFD1-207ENST00000554677 IGHV3OR16-13A0A075B7E8 117 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 IGHV3-74A0A0B4J1X5 117 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 NUPL2O15504 423 aaKnown RBP8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 MT-CO2P00403 227 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 APOHP02749 345 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 UCP3P55916 312 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 RELQ04864 619 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 TSPAN14Q8NG11 270 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 MISP3Q96FF7 219 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 TSC22D3Q99576 134 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 KRTAP17-1Q9BYP8 105 aa8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
MTHFD1-207ENST00000554677 IGKV3-7A0A075B6H7 116 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 TRAV14DV4A0A0A6YYC5 116 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 TFPI2P48307 235 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 HSPE1P61604 102 aaKnown RBP8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 PRCDQ00LT1 54 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 IZUMO4Q1ZYL8 232 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 LPCAT3Q6P1A2 487 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 TOMM20LQ6UXN7 152 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 GBGT1Q8N5D6 347 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 VSIRQ9H7M9 311 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 HERC2O95714 4834 aa8.95□□□□□ -0.98
MTHFD1-207ENST00000554677 MPTX1A8MV57 137 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 DEDDO75618 318 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 YIF1AO95070 293 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 P0C879 139 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 CMC4P56277 68 aaPredicted RBP8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 TSPAN5P62079 268 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 H2BFWTQ7Z2G1 175 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 TMEM217Q8N7C4 229 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 OR4A16Q8NH70 328 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 GATAD1Q8WUU5 269 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 ST8SIA2Q92186 375 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 MRGPRFQ96AM1 343 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 RARRES2Q99969 163 aa8.94□□□□□ -0.98
MTHFD1-207ENST00000554677 A0A0B4J293 547 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 GNG7O60262 68 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 TMEM50AO95807 157 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 IGKV1-5P01602 117 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 SPINK9Q5DT21 86 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 TCF24Q7RTU0 167 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 FAM24BQ8N5W8 94 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 OR11H2Q8NH07 326 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 C6orf62Q9GZU0 229 aaPredicted RBP8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 ZFAND3Q9H8U3 227 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 SCPEP1Q9HB40 452 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 MRPL36Q9P0J6 103 aaKnown RBP8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 COMMD3Q9UBI1 195 aa8.93□□□□□ -0.98
MTHFD1-207ENST00000554677 A0A1B0GU03 582 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 INS-IGF2F8WCM5 200 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 M0QYG6 137 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 DFFBO76075 338 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 APOA1P02647 267 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 GIG44P09565 113 aaPredicted RBP8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 ELK1P19419 428 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 RND3P61587 244 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 ERHP84090 104 aaKnown RBP8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 MLANAQ16655 118 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 LHFPL1Q86WI0 220 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 SNX29P2Q8IUI4 249 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 PINX1Q96BK5 328 aaKnown RBP8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 CMTM3Q96MX0 182 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 MS4A6AQ9H2W1 248 aa8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 C11orf68Q9H3H3 251 aaKnown RBP8.92□□□□□ -0.98
MTHFD1-207ENST00000554677 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 DEFB4AO15263 64 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 HPGDSO60760 199 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PI3P19957 117 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 S100GP29377 79 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 RCVRNP35243 200 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 DEFB131AP59861 70 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 NCS1P62166 190 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PRR20EP86478 221 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PRR20CP86479 221 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PRR20DP86480 221 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PRR20BP86481 221 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PRR20AP86496 221 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 ZNF600Q6ZNG1 722 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 C11orf45Q8TAV5 145 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 TP53RKQ96S44 253 aa8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 FNDC4Q9H6D8 234 aaPredicted RBP8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 PUS1Q9Y606 427 aaKnown RBP eCLIP8.91□□□□□ -0.98
MTHFD1-207ENST00000554677 A0A087WXM4 84 aa8.9□□□□□ -0.98
MTHFD1-207ENST00000554677 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms