RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 EDARADDQ8WWZ3 215 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 OR4C12Q96R67 309 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 OR4F4Q96R69 305 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 PYGO2Q9BRQ0 406 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 GGACTQ9BVM4 153 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 RAB9BQ9NP90 201 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 GNG13Q9P2W3 67 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 GAB2Q9UQC2 676 aa9.14□□□□□ -0.95
VPS33B-204ENST00000554660 A0A1W2PPE3 182 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 A0A1W2PRX2 142 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 C12orf77C9JDV5 145 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 C17orf112F2Z3M2 114 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 CLN5O75503 358 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 FABP1P07148 127 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 KIR2DS2P43631 304 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 RAB11AP62491 216 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
VPS33B-204ENST00000554660 ARL16Q0P5N6 197 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 OR10P1Q8NGE3 313 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 OR52E5Q8NH55 327 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 PIFOQ8TCI5 191 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 GPHA2Q96T91 129 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 RSG1Q9BU20 258 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 MEGF9Q9H1U4 602 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 RBKSQ9H477 322 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 SLC39A9Q9NUM3 307 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 RYR2Q92736 4967 aa9.13□□□□□ -0.95
VPS33B-204ENST00000554660 H3BP45 60 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 KBTBD11O94819 623 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 HBZP02008 142 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 IAPPP10997 89 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 NQO2P16083 231 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 CD33P20138 364 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 COX7A1P24310 79 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 OR3A1P47881 315 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 PSMB3P49720 205 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 OR2B8PP59922 312 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 MEF2BQ02080 365 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-204ENST00000554660 TMEM95Q3KNT9 176 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 TMEM30BQ3MIR4 351 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 SPANXN5Q5MJ07 72 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 C5orf24Q7Z6I8 188 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 TMEM219Q86XT9 240 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 ZNRF1Q8ND25 227 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 ANAPC16Q96DE5 110 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 FAM210BQ96KR6 192 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-204ENST00000554660 OR2D2Q9H210 308 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 KCNIP2Q9NS61 270 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 GAR1Q9NY12 217 aaKnown RBP9.12□□□□□ -0.95
VPS33B-204ENST00000554660 JPT1Q9UK76 154 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 DMRT1Q9Y5R6 373 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 RFNGQ9Y644 331 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 TENM3Q9P273 2699 aa9.12□□□□□ -0.95
VPS33B-204ENST00000554660 A0A1B0GV50 99 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 WI2-2373I1.2A0A1W2PRP0 233 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 ODAMA1E959 279 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 SPINT2O43291 252 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 PSPNO60542 156 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF737O75373 536 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 GZMHP20718 246 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 S100A2P29034 98 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 GABRA2P47869 451 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 ERVFRD-1P60508 538 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 SSX2Q16385 188 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF674Q2M3X9 581 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 LHFPL4Q7Z7J7 247 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 DTD1Q8TEA8 209 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 WIPF2Q8TF74 440 aaPredicted RBP9.11□□□□□ -0.95
VPS33B-204ENST00000554660 COQ2Q96H96 371 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 SRD5A3Q9H8P0 318 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 NIT2Q9NQR4 276 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 DOK5Q9P104 306 aa9.11□□□□□ -0.95
VPS33B-204ENST00000554660 IGKV1D-17A0A075B6S4 117 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 UBE2L5PA0A1B0GUS4 154 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 ZFP92A6NM28 416 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF727A8MUV8 499 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 PPP1R2P9O14990 202 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 CYB5BO43169 146 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 YPEL1O60688 119 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 CXCL1P09341 107 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 TMEM241Q24JQ0 296 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 ACOT6Q3I5F7 207 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-204ENST00000554660 DEFB121Q5J5C9 76 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 COA6Q5JTJ3 125 aaKnown RBP9.1□□□□□ -0.95
VPS33B-204ENST00000554660 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 Q6ZS46 218 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 H2BFWTQ7Z2G1 175 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 DYNAPQ8N1N2 210 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 Q8N2B8 174 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 RPP25LQ8N5L8 163 aaKnown RBP9.1□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF709Q8N972 641 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-204ENST00000554660 OR1L1Q8NH94 360 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
VPS33B-204ENST00000554660 TCF19Q9Y242 345 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms