RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 IGHV3-49A0A0A0MS15 119 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 SP9P0CG40 484 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 TNFRSF18Q9Y5U5 241 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 NDUFA3O95167 84 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 SNRPD3P62318 126 aaKnown RBP11.7□□□□□ -0.54
VTI1B-204ENST00000554659 ZNF497Q6ZNH5 498 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 PLXNA1Q9UIW2 1896 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 A0A0G2JMZ2 1700 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 LRRC37A2A6NM11 1700 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 YPEL1O60688 119 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 YPEL2Q96QA6 119 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 WFDC1Q9HC57 220 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 PGPEP1Q9NXJ5 209 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 DICER1Q9UPY3 1922 aaKnown RBP11.7□□□□□ -0.54
VTI1B-204ENST00000554659 APOBEC3AP31941 199 aaPredicted RBP11.7□□□□□ -0.54
VTI1B-204ENST00000554659 FAM216BQ8N7L0 139 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
VTI1B-204ENST00000554659 CHODLQ9H9P2 273 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 TMEM242Q9NWH2 141 aa11.7□□□□□ -0.54
VTI1B-204ENST00000554659 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
VTI1B-204ENST00000554659 LOC102723996A0A087X1L8 192 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 ZNF883P0CG24 379 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 RTN4RL2Q86UN3 420 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 CACNA1IQ9P0X4 2223 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.54
VTI1B-204ENST00000554659 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 PIMREGQ9BSJ6 248 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 NHP2Q9NX24 153 aaKnown RBP11.69□□□□□ -0.54
VTI1B-204ENST00000554659 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 IGHV1-2P23083 117 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 ASIPP42127 132 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 TMPRSS3P57727 454 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 LHFPL1Q86WI0 220 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 DCTN5Q9BTE1 182 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
VTI1B-204ENST00000554659 VCX2Q9H322 139 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 FBXL15Q9H469 300 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 DIDO1Q9BTC0 2240 aaKnown RBP11.69□□□□□ -0.54
VTI1B-204ENST00000554659 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 C15orf61A6NNL5 157 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 H7C1H1 209 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 ADMP35318 185 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 OSTCQ9NRP0 149 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 ZNF319Q9P2F9 582 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 S4R3C0 116 aa11.69□□□□□ -0.54
VTI1B-204ENST00000554659 UPK2O00526 184 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 OTOFQ9HC10 1997 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 ALPK2Q86TB3 2170 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 FAM90A9PA6NNJ1 464 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 HIGD1CA8MV81 97 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 TMEM101Q96IK0 257 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 NPFFR1Q9GZQ6 430 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 Q9H3A6 140 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 UMODP07911 640 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 ORMDL3Q8N138 153 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 A0A1B0GW64 132 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.68□□□□□ -0.54
VTI1B-204ENST00000554659 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 FOXA2Q9Y261 457 aaPredicted RBP11.68□□□□□ -0.54
VTI1B-204ENST00000554659 IGKV1D-8A0A087WSZ0 117 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 IGHV3-23P01764 117 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 CYTL1Q9NRR1 136 aa11.68□□□□□ -0.54
VTI1B-204ENST00000554659 COLCA2A8K830 154 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 LHX2P50458 406 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 FBLN7Q53RD9 439 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 TEX29Q8N6K0 151 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 C2orf88Q9BSF0 95 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 TRAV12-3A0A0B4J271 114 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 RIPPLY3P57055 190 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 A0A1W2PRE2 83 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 PGPEP1LA6NFU8 196 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 FOXH1O75593 365 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 SAA1P0DJI8 122 aaPredicted RBP11.67□□□□□ -0.54
VTI1B-204ENST00000554659 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 ZNF257Q9Y2Q1 563 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 H3BRM9 83 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
VTI1B-204ENST00000554659 FAM201AQ5SY85 155 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 C1QL4Q86Z23 238 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
VTI1B-204ENST00000554659 RNASE7Q9H1E1 156 aaKnown RBP11.67□□□□□ -0.54
VTI1B-204ENST00000554659 NYNRINQ9P2P1 1898 aaKnown RBP11.67□□□□□ -0.54
VTI1B-204ENST00000554659 GATA2P23769 480 aaPredicted RBP11.66□□□□□ -0.54
VTI1B-204ENST00000554659 MYOFQ9NZM1 2061 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 MTCL1Q9Y4B5 1905 aaKnown RBP11.66□□□□□ -0.54
VTI1B-204ENST00000554659 PDCD11Q14690 1871 aaKnown RBP11.66□□□□□ -0.54
VTI1B-204ENST00000554659 CRYGSP22914 178 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 CKS1BP61024 79 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 COLQQ9Y215 455 aaPredicted RBP11.66□□□□□ -0.54
VTI1B-204ENST00000554659 HAX1O00165 279 aa11.66□□□□□ -0.54
VTI1B-204ENST00000554659 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms