RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 C15orf61A6NNL5 157 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 E7EUB6 86 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 CLDN34H7C241 214 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 GOSR2O14653 212 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 TSPAN4O14817 238 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 ST8SIA3O43173 380 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 FGF16O43320 207 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 GPR137BO60478 399 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 PITX3O75364 302 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 IFNA21P01568 189 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 SLC25A6P12236 298 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 CXCL3P19876 107 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 H2BFSP57053 126 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 OR2B8PP59922 312 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 HILS1P60008 231 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 UBA52P62987 128 aaKnown RBP4.94□□□□□ -1.62
SCFD1-212ENST00000554486 NDPQ00604 133 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 SMCO1Q147U7 214 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 AARDQ4LEZ3 155 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 C10orf55Q5SWW7 151 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 RBMS3Q6XE24 437 aaKnown RBP4.94□□□□□ -1.62
SCFD1-212ENST00000554486 PPP1R27Q86WC6 154 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 FOXRED2Q8IWF2 684 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 OR5M8Q8NGP6 311 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 OR4A5Q8NH83 315 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 VSTM2AQ8TAG5 236 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 TMEM18Q96B42 140 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 OR10C1Q96KK4 312 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 CLCC1Q96S66 551 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 RASL11BQ9BPW5 248 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 HSPB9Q9BQS6 159 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 MED28Q9H204 178 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 RANBP3Q9H6Z4 567 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF430Q9H8G1 570 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-212ENST00000554486 TMEM14BQ9NUH8 114 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 FOXA2Q9Y261 457 aaPredicted RBP4.94□□□□□ -1.62
SCFD1-212ENST00000554486 C13orf42A0A1B0GVH6 325 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 C5orf51A6NDU8 294 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 M0QZK8 103 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 SNAPC5O75971 98 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 CA2P00918 260 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 HLA-DRB1P01911 266 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 COMPP49747 757 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 BCAP31P51572 246 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 RPL8P62917 257 aaKnown RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 BLCAPP62952 87 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 CX3CL1P78423 397 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 IL15RAQ13261 267 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 PLGLAQ15195 96 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 IAH1Q2TAA2 248 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 CXorf66Q5JRM2 361 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 THOC7Q6I9Y2 204 aaKnown RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 GSG1LQ6UXU4 331 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF562Q6V9R5 426 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 MMD2Q8IY49 270 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 ZBTB8BQ8NAP8 495 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 OR4D5Q8NGN0 318 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 OR1L8Q8NGR8 309 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 OR4A16Q8NH70 328 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 TAF15Q92804 592 aaKnown RBP eCLIP4.93□□□□□ -1.626e-10■■■□□ 17.7
SCFD1-212ENST00000554486 C2orf50Q96LR7 162 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF702PQ9H963 129 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.93□□□□□ -1.62
SCFD1-212ENST00000554486 COA4Q9NYJ1 87 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 PRNDQ9UKY0 176 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 OR51B2Q9Y5P1 312 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 ATRQ13535 2644 aa4.93□□□□□ -1.62
SCFD1-212ENST00000554486 TEX50A0A1B0GTY4 177 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 TCF21O43680 179 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 IGHG2P01859 326 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 OPN1MWP04001 364 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 OPN1MW2P0DN77 364 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 OPN1MW3P0DN78 364 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 MAS1LP35410 378 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 RPL27AP46776 148 aaKnown RBP4.92□□□□□ -1.62
SCFD1-212ENST00000554486 HSPE1P61604 102 aaKnown RBP4.92□□□□□ -1.62
SCFD1-212ENST00000554486 GNB1P62873 340 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 TNFRSF9Q07011 255 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 FXYD3Q14802 87 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 TNXAQ16473 311 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 PDLIM3Q53GG5 364 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-212ENST00000554486 SPINK9Q5DT21 86 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 NOXA1Q86UR1 476 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF429Q86V71 674 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 Q8N2B8 174 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 OR1S1Q8NH92 325 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 GRPEL2Q8TAA5 225 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 SRSF12Q8WXF0 261 aaKnown RBP4.92□□□□□ -1.62
SCFD1-212ENST00000554486 RNF183Q96D59 192 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 SPIN2AQ99865 258 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 SPIN2BQ9BPZ2 258 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF436Q9C0F3 470 aaPredicted RBP4.92□□□□□ -1.62
SCFD1-212ENST00000554486 NDUFA4L2Q9NRX3 87 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 FKBP11Q9NYL4 201 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 GSKIPQ9P0R6 139 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF257Q9Y2Q1 563 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 FBXO7Q9Y3I1 522 aa4.92□□□□□ -1.62
SCFD1-212ENST00000554486 IGLC7A0M8Q6 106 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 MSGN1A6NI15 193 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms