RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 A0A1B0GU03 582 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 PQLC2LA1A4F0 135 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 OR5B21A6NL26 309 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF724A8MTY0 619 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 HSD17B6O14756 317 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 GEMIN2O14893 280 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 BET1O15155 118 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 SIGLEC5O15389 551 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 NDUFA2O43678 99 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 PDCD6O75340 191 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 MRPL33O75394 65 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 IFNA21P01568 189 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 CFC1BP0CG36 223 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 CFC1P0CG37 223 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 C8orf88P0DMB2 117 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 OR5H8P0DN80 308 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 SSTR5P35346 364 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 OPRM1P35372 400 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 PMELP40967 661 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 RIPPLY3P57055 190 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 GNB1P62873 340 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 RPL31P62899 125 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 FLI1Q01543 452 aaPredicted RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 TMEM187Q14656 261 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 LAGE3Q14657 143 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 PIGYQ3MUY2 71 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 VKORC1L1Q8N0U8 176 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 LGI3Q8N145 548 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 OSR2Q8N2R0 312 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 OR10J5Q8NHC4 309 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 TMEM190Q8WZ59 177 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 DCUN1D4Q92564 292 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 MARC2Q969Z3 335 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 BORCS8Q96FH0 119 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 CPNE2Q96FN4 548 aaPredicted RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX3Q96PT4 197 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 S100A13Q99584 98 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 CMSS1Q9BQ75 279 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 TTTY12Q9BZ98 90 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 C14orf166Q9Y224 244 aaKnown RBP4.12□□□□□ -1.75
MTHFD1-206ENST00000554353 ABCA4P78363 2273 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 ANK3Q12955 4377 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF850A8MQ14 1090 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 FAM166BA8MTA8 275 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 J3QLI3 93 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 DNASE2O00115 360 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 IGHV3-9P01782 118 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 TPT1P13693 172 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 COX5AP20674 150 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 RBMXP38159 391 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 RBM11P57052 281 aaKnown RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 BTN1A1Q13410 526 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 C10orf91Q5T1B1 145 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 ELP2Q6IA86 826 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 Q6ZS49 121 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 Q6ZVQ6 151 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 SGPP2Q8IWX5 399 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 BAP18Q8IXM2 172 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 SAXO1Q8IYX7 474 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF502Q8TBZ5 544 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 GALNT14Q96FL9 552 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 C18orf12Q96KH6 178 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 POM121L2Q96KW2 1035 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 RBKSQ9H477 322 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 C11orf1Q9H5F2 150 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 FNDC4Q9H6D8 234 aaPredicted RBP4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 NAA60Q9H7X0 242 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 RHOFQ9HBH0 211 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 GLS2Q9UI32 602 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 SLC7A11Q9UPY5 501 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 ST3GAL6Q9Y274 331 aa4.11□□□□□ -1.75
MTHFD1-206ENST00000554353 KIR2DL5BA0A0G2JN68 375 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 KIR2DL5BA0A0G2JPC4 375 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 A0A1B0GW55 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 NKX2-6A6NCS4 301 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 K7EPK0 472 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 PHF1O43189 567 aaPredicted RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SYNGR1O43759 233 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DEDDO75618 318 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 NAPSAO96009 420 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 CD5P06127 495 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 OR5AC1P0C628 307 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L2P0CJ85 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L3P0CJ86 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L4P0CJ87 422 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L5P0CJ88 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L6P0CJ89 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 DUX4L7P0CJ90 424 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 ZNF728P0DKX0 622 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 RPL35AP18077 110 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 BCL3P20749 454 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 FCGR2CP31995 323 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 SAA4P35542 130 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 PIGPP57054 158 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 TMEM33P57088 247 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 RANP62826 216 aaKnown RBP4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 PRDX4Q13162 271 aa4.1□□□□□ -1.75
MTHFD1-206ENST00000554353 IAH1Q2TAA2 248 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms