RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 ELK1P19419 428 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 NCS1P62166 190 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 FAM90A2PQ658T7 463 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 SNX29P2Q8IUI4 249 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 TMEM116Q8NCL8 245 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 MRGPRFQ96AM1 343 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 FUNDC2Q9BWH2 189 aa16.13■□□□□ 0.17
RCCD1-202ENST00000554302 CXorf65A6NEN9 183 aa16.12■□□□□ 0.17
RCCD1-202ENST00000554302 TNP2Q05952 138 aa16.12■□□□□ 0.17
RCCD1-202ENST00000554302 PMS2P11Q13670 270 aa16.12■□□□□ 0.17
RCCD1-202ENST00000554302 MISP3Q96FF7 219 aa16.12■□□□□ 0.17
RCCD1-202ENST00000554302 KMT2AQ03164 3969 aa16.12■□□□□ 0.17
RCCD1-202ENST00000554302 P0C879 139 aa16.11■□□□□ 0.17
RCCD1-202ENST00000554302 RPL35AP18077 110 aaKnown RBP16.11■□□□□ 0.17
RCCD1-202ENST00000554302 RND3P61587 244 aa16.11■□□□□ 0.17
RCCD1-202ENST00000554302 VBP1P61758 197 aa16.11■□□□□ 0.17
RCCD1-202ENST00000554302 CEMP1Q6PRD7 247 aaPredicted RBP16.11■□□□□ 0.17
RCCD1-202ENST00000554302 LHFPL1Q86WI0 220 aa16.11■□□□□ 0.17
RCCD1-202ENST00000554302 APRG1Q8IVJ8 170 aa16.11■□□□□ 0.17
RCCD1-202ENST00000554302 FRAS1Q86XX4 4008 aa16.1■□□□□ 0.17
RCCD1-202ENST00000554302 TRAV14DV4A0A0A6YYC5 116 aa16.1■□□□□ 0.17
RCCD1-202ENST00000554302 INS-IGF2F8WCM5 200 aa16.1■□□□□ 0.17
RCCD1-202ENST00000554302 HPGDSO60760 199 aa16.1■□□□□ 0.17
RCCD1-202ENST00000554302 CMC4P56277 68 aaPredicted RBP16.1■□□□□ 0.17
RCCD1-202ENST00000554302 PVRIGQ6DKI7 326 aa16.1■□□□□ 0.17
RCCD1-202ENST00000554302 ZNF486Q96H40 463 aaPredicted RBP16.1■□□□□ 0.17
RCCD1-202ENST00000554302 M0QYG6 137 aa16.09■□□□□ 0.17
RCCD1-202ENST00000554302 YIF1AO95070 293 aa16.09■□□□□ 0.17
RCCD1-202ENST00000554302 IGHV3-48P01763 117 aa16.09■□□□□ 0.17
RCCD1-202ENST00000554302 ERHP84090 104 aaKnown RBP16.09■□□□□ 0.17
RCCD1-202ENST00000554302 ZNF124Q15973 351 aa16.09■□□□□ 0.17
RCCD1-202ENST00000554302 IGHV3-49A0A0A0MS15 119 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 GNG7O60262 68 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 IGKV1-5P01602 117 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 IZUMO4Q1ZYL8 232 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 TOMM20LQ6UXN7 152 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 C6orf62Q9GZU0 229 aaPredicted RBP16.08■□□□□ 0.16
RCCD1-202ENST00000554302 CSTL1Q9H114 145 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 VSIRQ9H7M9 311 aa16.08■□□□□ 0.16
RCCD1-202ENST00000554302 A0A0B4J293 547 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 LY6G6CO95867 125 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 RORCP51449 518 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 ARRDC1Q8N5I2 433 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 TMEM217Q8N7C4 229 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 PINX1Q96BK5 328 aaKnown RBP16.07■□□□□ 0.16
RCCD1-202ENST00000554302 KLK11Q9UBX7 282 aa16.07■□□□□ 0.16
RCCD1-202ENST00000554302 CD5P06127 495 aa16.06■□□□□ 0.16
RCCD1-202ENST00000554302 GATAD1Q8WUU5 269 aa16.06■□□□□ 0.16
RCCD1-202ENST00000554302 TP53RKQ96S44 253 aa16.06■□□□□ 0.16
RCCD1-202ENST00000554302 GINS3Q9BRX5 216 aa16.06■□□□□ 0.16
RCCD1-202ENST00000554302 IGHV3OR16-13A0A075B7E8 117 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 IGHV3-74A0A0B4J1X5 117 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 A6NHS1 94 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 MPTX1A8MV57 137 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 APOHP02749 345 aaPredicted RBP16.05■□□□□ 0.16
RCCD1-202ENST00000554302 PI3P19957 117 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 NPBWR1P48145 328 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 TFPI2P48307 235 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 PIGPP57054 158 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 SPINK9Q5DT21 86 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 TCF24Q7RTU0 167 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 LILRB2Q8N423 598 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 DUSP18Q8NEJ0 188 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 ST8SIA2Q92186 375 aa16.05■□□□□ 0.16
RCCD1-202ENST00000554302 KLK5Q9Y337 293 aaPredicted RBP16.05■□□□□ 0.16
RCCD1-202ENST00000554302 IGKV3-7A0A075B6H7 116 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 ST8SIA3O43173 380 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 TMEM50AO95807 157 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 CD3DP04234 171 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 TBPP20226 339 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 RNASE10Q5GAN6 216 aaKnown RBP16.04■□□□□ 0.16
RCCD1-202ENST00000554302 ZNF600Q6ZNG1 722 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 GBGT1Q8N5D6 347 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 OR52I2Q8NH67 350 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 MTFP1Q9UDX5 166 aa16.04■□□□□ 0.16
RCCD1-202ENST00000554302 C3orf85A0A1B0GTC6 90 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 RNASE2P10153 161 aaKnown RBP16.03■□□□□ 0.16
RCCD1-202ENST00000554302 PGAM2P15259 253 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 SNCAP37840 140 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 PAFAH1B2P68402 229 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 CTF1Q16619 201 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 MZT2AQ6P582 158 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 PUS1Q9Y606 427 aaKnown RBP eCLIP16.03■□□□□ 0.16
RCCD1-202ENST00000554302 DNAH10Q8IVF4 4471 aa16.03■□□□□ 0.16
RCCD1-202ENST00000554302 TRAV2A0A0B4J234 112 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 A0A1B0GU03 582 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 FAM25AB3EWG3 89 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 FAM25CB3EWG5 89 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 FAM25GB3EWG6 89 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 AKR1C2P52895 323 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 RNASE12Q5GAN4 147 aaKnown RBP16.02■□□□□ 0.16
RCCD1-202ENST00000554302 SLC35G3Q8N808 338 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 PHLDA1Q8WV24 401 aaPredicted RBP16.02■□□□□ 0.16
RCCD1-202ENST00000554302 ABHD1Q96SE0 405 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 RARRES2Q99969 163 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 MS4A6AQ9H2W1 248 aa16.02■□□□□ 0.16
RCCD1-202ENST00000554302 VPS13DQ5THJ4 4388 aa16.01■□□□□ 0.15
RCCD1-202ENST00000554302 CORTO00230 105 aa16.01■□□□□ 0.15
RCCD1-202ENST00000554302 DFFBO76075 338 aa16.01■□□□□ 0.15
RCCD1-202ENST00000554302 ATG12O94817 140 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms