RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 PRNDQ9UKY0 176 aa12.72□□□□□ -0.37
NEK9-204ENST00000554258 FOXA2Q9Y261 457 aaPredicted RBP12.72□□□□□ -0.37
NEK9-204ENST00000554258 A0A0J9YWU9 116 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 CGB1A6NKQ9 187 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 C15orf61A6NNL5 157 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 G3V318 75 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 SNAPC5O75971 98 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 SLC25A6P12236 298 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 IZUMO4Q1ZYL8 232 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 LCN12Q6JVE5 192 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 C12orf45Q8N5I9 185 aaPredicted RBP12.71□□□□□ -0.37
NEK9-204ENST00000554258 PHB2Q99623 299 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 FKBP11Q9NYL4 201 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 NSG2Q9Y328 171 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 FBXO7Q9Y3I1 522 aa12.71□□□□□ -0.37
NEK9-204ENST00000554258 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 A0A1B0GU03 582 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 A0A1B0GW64 132 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 E7EUB6 86 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 PITX3O75364 302 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
NEK9-204ENST00000554258 OR2B8PP59922 312 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 TNXAQ16473 311 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 GGNBP1Q5YKI7 109 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 SRSF12Q8WXF0 261 aaKnown RBP12.7□□□□□ -0.38
NEK9-204ENST00000554258 NDUFA4L2Q9NRX3 87 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.7□□□□□ -0.38
NEK9-204ENST00000554258 ZNF257Q9Y2Q1 563 aa12.7□□□□□ -0.38
NEK9-204ENST00000554258 PRSS29PA6NIE9 313 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 TEX22C9J3V5 150 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 ATP6V0E1O15342 81 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 ACTL6BO94805 426 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 HOXB5P09067 269 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 MYOD1P15172 320 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 RPL27AP46776 148 aaKnown RBP12.69□□□□□ -0.38
NEK9-204ENST00000554258 CD81P60033 236 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 HSPE1P61604 102 aaKnown RBP12.69□□□□□ -0.38
NEK9-204ENST00000554258 TATDN3Q17R31 274 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 AKIRIN2Q53H80 203 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 C10orf55Q5SWW7 151 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 OR1L8Q8NGR8 309 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 OR5B3Q8NH48 314 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 OR4A16Q8NH70 328 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 TMEM68Q96MH6 324 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 SRSF8Q9BRL6 282 aaKnown RBP12.69□□□□□ -0.38
NEK9-204ENST00000554258 OVOL2Q9BRP0 275 aa12.69□□□□□ -0.38
NEK9-204ENST00000554258 MSGN1A6NI15 193 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 ADAP1O75689 374 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 SMCO1Q147U7 214 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 DEFB125Q8N687 156 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 OR52E5Q8NH55 327 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 RNASE11Q8TAA1 199 aaKnown RBP12.68□□□□□ -0.38
NEK9-204ENST00000554258 PHLDA1Q8WV24 401 aaPredicted RBP12.68□□□□□ -0.38
NEK9-204ENST00000554258 SPIN2AQ99865 258 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 SPIN2BQ9BPZ2 258 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 QTRT1Q9BXR0 403 aaKnown RBP12.68□□□□□ -0.38
NEK9-204ENST00000554258 COMMD5Q9GZQ3 224 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 SRD5A3Q9H8P0 318 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 PARP11Q9NR21 331 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 CACNG5Q9UF02 275 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 OR51B2Q9Y5P1 312 aa12.68□□□□□ -0.38
NEK9-204ENST00000554258 INS-IGF2F8WCM5 200 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 ST8SIA3O43173 380 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 NDUFB8O95169 186 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 TMEM267Q0VDI3 215 aaPredicted RBP12.67□□□□□ -0.38
NEK9-204ENST00000554258 THOC7Q6I9Y2 204 aaKnown RBP12.67□□□□□ -0.38
NEK9-204ENST00000554258 ZNF575Q86XF7 245 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 FAM103A1Q9BTL3 118 aaKnown RBP12.67□□□□□ -0.38
NEK9-204ENST00000554258 ALG5Q9Y673 324 aa12.67□□□□□ -0.38
NEK9-204ENST00000554258 TRAV41A0A0B4J266 112 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 IFNA21P01568 189 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 IGHV3-11P01762 117 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 TRAPPC2P0DI81 140 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 TRAPPC2BP0DI82 140 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 TNFRSF9Q07011 255 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 KLK9Q2XQG4 91 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 LFNGQ8NES3 379 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 GRPEL2Q8TAA5 225 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 KLK9Q9UKQ9 250 aa12.66□□□□□ -0.38
NEK9-204ENST00000554258 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 IZUMO1RA6ND01 250 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 MPTX1A8MV57 137 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 CRYGCP07315 174 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 SPCS3P61009 180 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 HSD17B13Q7Z5P4 300 aaPredicted RBP12.65□□□□□ -0.38
NEK9-204ENST00000554258 TTC9CQ8N5M4 171 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 OR10C1Q96KK4 312 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 HSPB7Q9UBY9 170 aa12.65□□□□□ -0.38
NEK9-204ENST00000554258 HMX3A6NHT5 357 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 NPIPB5A8MRT5 1133 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 FAM90A26D6RGX4 464 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 SOX15O60248 233 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 ID3Q02535 119 aa12.64□□□□□ -0.39
NEK9-204ENST00000554258 IL15RAQ13261 267 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms