RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RBMX2Q9Y388 322 aaKnown RBP4.8□□□□□ -1.64
ATXN3-224ENST00000554040 ORC6Q9Y5N6 252 aa4.8□□□□□ -1.64
ATXN3-224ENST00000554040 PNMA8CA0A1B0GUJ8 204 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 TEX48A0A1B0GUV7 120 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 K7EIM0 57 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 GYG2O15488 501 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 ST8SIA3O43173 380 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 SLC22A5O76082 557 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 HLA-DQB1P01920 261 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 APOHP02749 345 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 EIF4EP06730 217 aaKnown RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 SERPINE2P07093 398 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 FCGR3AP08637 254 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 OR13C7P0DN81 318 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 HTN3P15516 51 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 CD36P16671 472 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 MAPK3P27361 379 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 MRPS15P82914 257 aaKnown RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 EIF4EBP1Q13541 118 aaPredicted RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 OXA1LQ15070 435 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 ZBTB34Q8NCN2 500 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 OR10W1Q8NGF6 305 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 TCTEX1D2Q8WW35 142 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 APH1BQ8WW43 257 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 GRAMD2BQ96HH9 432 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 HSD17B10Q99714 261 aaKnown RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 C1QTNF4Q9BXJ3 329 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 QTRT1Q9BXR0 403 aaKnown RBP4.79□□□□□ -1.64
ATXN3-224ENST00000554040 PTTG2Q9NZH5 202 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 XCL2Q9UBD3 114 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 RABAC1Q9UI14 185 aa4.79□□□□□ -1.64
ATXN3-224ENST00000554040 TRAV3A0A0B4J244 114 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 SMIM9A6NGZ8 99 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 K7EQG2 157 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 UPK2O00526 184 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 SMR3BP02814 79 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 HNRNPCP07910 306 aaKnown RBP eCLIP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF688P0C7X2 276 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 TRAPPC2P0DI81 140 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 TRAPPC2BP0DI82 140 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 GNB3P16520 340 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 MYL12AP19105 171 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 NUTF2P61970 127 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 TIMM50Q3ZCQ8 353 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 DNAL1Q4LDG9 190 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 THOC7Q6I9Y2 204 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF773Q6PK81 442 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF705AQ6ZN79 300 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 HSD17B13Q7Z5P4 300 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 OR56B1Q8NGI3 324 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 MAFIPQ8WZ33 124 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 C17orf77Q96MU5 243 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 RAB40CQ96S21 281 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 GINS3Q9BRX5 216 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 WDR12Q9GZL7 423 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 COMMD5Q9GZQ3 224 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 NXF2Q9GZY0 626 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 HRASLSQ9HDD0 168 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 MED4Q9NPJ6 270 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 ZNF446Q9NWS9 450 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 SPATA2Q9UM82 520 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 DIMT1Q9UNQ2 313 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 KCNK7Q9Y2U2 307 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 OR2W1Q9Y3N9 320 aa4.78□□□□□ -1.64
ATXN3-224ENST00000554040 F11RQ9Y624 299 aaKnown RBP4.78□□□□□ -1.64
ATXN3-224ENST00000554040 IRGMA1A4Y4 181 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 ZNF705FA8MVS1 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-224ENST00000554040 EI24O14681 340 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 FGF2P09038 288 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 ZNF705DP0CH99 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-224ENST00000554040 ZNF705BP0CI00 300 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-224ENST00000554040 FGF9P31371 208 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-224ENST00000554040 MFAP4P55083 255 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 CCL18P55774 89 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 INSL4Q14641 139 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 P2RY14Q15391 338 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 ACSM3Q53FZ2 586 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 SUMO4Q6EEV6 95 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 TOMM20LQ6UXN7 152 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 Q6ZS49 121 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 PHYHIPQ92561 330 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 TXN2Q99757 166 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 TMEM231Q9H6L2 316 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 Q9H8V8 135 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 LINC00588Q9Y4M8 146 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 PUS1Q9Y606 427 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-224ENST00000554040 RFNGQ9Y644 331 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 LRP2P98164 4655 aa4.77□□□□□ -1.65
ATXN3-224ENST00000554040 IGKV1D-8A0A087WSZ0 117 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 IGKV1D-13A0A0B4J2D9 117 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 TEX50A0A1B0GTY4 177 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 LOC100130705A0A1B0GUX0 176 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 F5H697 171 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 WBP4O75554 376 aaKnown RBP4.76□□□□□ -1.65
ATXN3-224ENST00000554040 IGKV1-13P0DP09 117 aa4.76□□□□□ -1.65
ATXN3-224ENST00000554040 NFYAP23511 347 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-224ENST00000554040 TAS2R31P59538 309 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms