RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 WDR86Q86TI4 376 aa2.55□□□□□ -2
TDP1-207ENST00000553617 KTN1Q86UP2 1357 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 SLC22A24Q8N4F4 322 aa2.55□□□□□ -2
TDP1-207ENST00000553617 RNF175Q8N4F7 328 aa2.55□□□□□ -2
TDP1-207ENST00000553617 PACRGLQ8N7B6 248 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ZDHHC22Q8N966 263 aa2.55□□□□□ -2
TDP1-207ENST00000553617 Q8N976 141 aa2.55□□□□□ -2
TDP1-207ENST00000553617 PLPP5Q8NEB5 264 aa2.55□□□□□ -2
TDP1-207ENST00000553617 OR5D14Q8NGL3 314 aa2.55□□□□□ -2
TDP1-207ENST00000553617 NUP210Q8TEM1 1887 aaPredicted RBP2.55□□□□□ -2
TDP1-207ENST00000553617 MAGOHBQ96A72 148 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 GNPNAT1Q96EK6 184 aaPredicted RBP2.55□□□□□ -2
TDP1-207ENST00000553617 KCNS1Q96KK3 526 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ERMAPQ96PL5 475 aaPredicted RBP2.55□□□□□ -2
TDP1-207ENST00000553617 OR2A5Q96R48 311 aa2.55□□□□□ -2
TDP1-207ENST00000553617 TMEM243Q9BU79 118 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ADAT1Q9BUB4 502 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 KDM5DQ9BY66 1539 aa2.55□□□□□ -2
TDP1-207ENST00000553617 DOCK9Q9BZ29 2069 aa2.55□□□□□ -2
TDP1-207ENST00000553617 NSD3Q9BZ95 1437 aa2.55□□□□□ -2
TDP1-207ENST00000553617 ZNF436Q9C0F3 470 aaPredicted RBP2.55□□□□□ -2
TDP1-207ENST00000553617 C11orf68Q9H3H3 251 aaKnown RBP2.55□□□□□ -2
TDP1-207ENST00000553617 RNF122Q9H9V4 155 aa2.55□□□□□ -2
TDP1-207ENST00000553617 OTORQ9NRC9 128 aa2.55□□□□□ -2
TDP1-207ENST00000553617 TRBV20OR9-2A0A075B6H5 130 aa2.54□□□□□ -2
TDP1-207ENST00000553617 IGKV1-27A0A075B6S5 117 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TRAV9-1A0A075B6T8 112 aa2.54□□□□□ -2
TDP1-207ENST00000553617 IGHV5-51A0A0C4DH38 117 aa2.54□□□□□ -2
TDP1-207ENST00000553617 A0A1B0GVX0 72 aa2.54□□□□□ -2
TDP1-207ENST00000553617 C7orf71A4D174 169 aa2.54□□□□□ -2
TDP1-207ENST00000553617 CD300LBA8K4G0 201 aa2.54□□□□□ -2
TDP1-207ENST00000553617 B4DEV8 164 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TMEM250H0YL14 139 aa2.54□□□□□ -2
TDP1-207ENST00000553617 LY6LH3BQJ8 138 aa2.54□□□□□ -2
TDP1-207ENST00000553617 CDC42EP2O14613 210 aa2.54□□□□□ -2
TDP1-207ENST00000553617 COX7A2P2O60397 106 aa2.54□□□□□ -2
TDP1-207ENST00000553617 DEDDO75618 318 aa2.54□□□□□ -2
TDP1-207ENST00000553617 CD14P08571 375 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TRAPPC2P0DI81 140 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TRAPPC2BP0DI82 140 aa2.54□□□□□ -2
TDP1-207ENST00000553617 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
TDP1-207ENST00000553617 GABARAPL2P60520 117 aa2.54□□□□□ -2
TDP1-207ENST00000553617 ORMDL2Q53FV1 153 aa2.54□□□□□ -2
TDP1-207ENST00000553617 ZNF773Q6PK81 442 aa2.54□□□□□ -2
TDP1-207ENST00000553617 Q6ZS49 121 aa2.54□□□□□ -2
TDP1-207ENST00000553617 LINC00596Q86U02 117 aa2.54□□□□□ -2
TDP1-207ENST00000553617 PRR15Q8IV56 129 aa2.54□□□□□ -2
TDP1-207ENST00000553617 PCP2Q8IVA1 136 aa2.54□□□□□ -2
TDP1-207ENST00000553617 MKXQ8IYA7 352 aa2.54□□□□□ -2
TDP1-207ENST00000553617 ZNF664Q8N3J9 261 aa2.54□□□□□ -2
TDP1-207ENST00000553617 DRAM1Q8N682 238 aa2.54□□□□□ -2
TDP1-207ENST00000553617 YIPF7Q8N8F6 280 aa2.54□□□□□ -2
TDP1-207ENST00000553617 ZNF709Q8N972 641 aa2.54□□□□□ -2
TDP1-207ENST00000553617 OR2M3Q8NG83 312 aa2.54□□□□□ -2
TDP1-207ENST00000553617 SCGB1C1Q8TD33 95 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TEX37Q96LM6 180 aa2.54□□□□□ -2
TDP1-207ENST00000553617 GPX7Q96SL4 187 aaPredicted RBP2.54□□□□□ -2
TDP1-207ENST00000553617 TM2D3Q9BRN9 247 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TMEM191AQ9H0A3 160 aa2.54□□□□□ -2
TDP1-207ENST00000553617 CBLN4Q9NTU7 201 aa2.54□□□□□ -2
TDP1-207ENST00000553617 TAS2R8Q9NYW2 309 aa2.54□□□□□ -2
TDP1-207ENST00000553617 COMMD3Q9UBI1 195 aa2.54□□□□□ -2
TDP1-207ENST00000553617 IER3IP1Q9Y5U9 82 aa2.54□□□□□ -2
TDP1-207ENST00000553617 ATRXP46100 2492 aa2.54□□□□□ -2
TDP1-207ENST00000553617 PSME4Q14997 1843 aa2.54□□□□□ -2
TDP1-207ENST00000553617 BCORL1Q5H9F3 1711 aa2.54□□□□□ -2
TDP1-207ENST00000553617 HECW1Q76N89 1606 aa2.53□□□□□ -2
TDP1-207ENST00000553617 REREQ9P2R6 1566 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TROQ12816 1431 aaPredicted RBP2.53□□□□□ -2
TDP1-207ENST00000553617 SPATA31E1Q6ZUB1 1445 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TRAPPC8Q9Y2L5 1435 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TRBV6-6A0A0A6YYG2 114 aa2.53□□□□□ -2
TDP1-207ENST00000553617 PINLYPA6NC86 204 aa2.53□□□□□ -2
TDP1-207ENST00000553617 DPRXA6NFQ7 191 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TLCD2A6NGC4 264 aa2.53□□□□□ -2
TDP1-207ENST00000553617 FNDC10F2Z333 226 aa2.53□□□□□ -2
TDP1-207ENST00000553617 CCDC179H3BU77 68 aa2.53□□□□□ -2
TDP1-207ENST00000553617 M0R1X1 148 aa2.53□□□□□ -2
TDP1-207ENST00000553617 LGALS9O00182 355 aa2.53□□□□□ -2
TDP1-207ENST00000553617 LST1O00453 97 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SLC37A4O43826 429 aa2.53□□□□□ -2
TDP1-207ENST00000553617 TRGC2P03986 189 aa2.53□□□□□ -2
TDP1-207ENST00000553617 CD2P06729 351 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SPINK8P0C7L1 97 aa2.53□□□□□ -2
TDP1-207ENST00000553617 NFYBP25208 207 aa2.53□□□□□ -2
TDP1-207ENST00000553617 IMPA1P29218 277 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SDC2P34741 201 aa2.53□□□□□ -2
TDP1-207ENST00000553617 OPRM1P35372 400 aa2.53□□□□□ -2
TDP1-207ENST00000553617 ZNF93P35789 620 aaPredicted RBP2.53□□□□□ -2
TDP1-207ENST00000553617 TGFBR1P36897 503 aa2.53□□□□□ -2
TDP1-207ENST00000553617 POLR2IP36954 125 aaKnown RBP2.53□□□□□ -2
TDP1-207ENST00000553617 ETV6P41212 452 aa2.53□□□□□ -2
TDP1-207ENST00000553617 INSL3P51460 131 aa2.53□□□□□ -2
TDP1-207ENST00000553617 CATR1Q13166 79 aa2.53□□□□□ -2
TDP1-207ENST00000553617 ELOCQ15369 112 aa2.53□□□□□ -2
TDP1-207ENST00000553617 MSMO1Q15800 293 aa2.53□□□□□ -2
TDP1-207ENST00000553617 HES3Q5TGS1 186 aa2.53□□□□□ -2
TDP1-207ENST00000553617 LCN15Q6UWW0 184 aa2.53□□□□□ -2
TDP1-207ENST00000553617 SSX8Q7RTT4 187 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms